RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 CRKP46108 304 aa25.19■■□□□ 1.62
SERF1A-201ENST00000317633 SOX10P56693 466 aa25.19■■□□□ 1.62
SERF1A-201ENST00000317633 IFNL1Q8IU54 200 aa25.19■■□□□ 1.62
SERF1A-201ENST00000317633 IQSEC3Q9UPP2 1182 aaPredicted RBP25.19■■□□□ 1.62
SERF1A-201ENST00000317633 HDLBPQ00341 1268 aaKnown RBP25.18■■□□□ 1.62
SERF1A-201ENST00000317633 CHAF1AQ13111 956 aaPredicted RBP25.18■■□□□ 1.62
SERF1A-201ENST00000317633 OTUD7BQ6GQQ9 843 aa25.18■■□□□ 1.62
SERF1A-201ENST00000317633 IFIT1P09914 478 aaKnown RBP25.17■■□□□ 1.62
SERF1A-201ENST00000317633 VGLL2Q8N8G2 317 aa25.17■■□□□ 1.62
SERF1A-201ENST00000317633 FBXO46Q6PJ61 603 aaPredicted RBP25.16■■□□□ 1.62
SERF1A-201ENST00000317633 KLHDC4Q8TBB5 520 aa25.16■■□□□ 1.62
SERF1A-201ENST00000317633 KIF16BQ96L93 1317 aa25.15■■□□□ 1.62
SERF1A-201ENST00000317633 TCP10L2B9ZVM9 353 aa25.15■■□□□ 1.62
SERF1A-201ENST00000317633 PUM3Q15397 648 aaKnown RBP25.15■■□□□ 1.62
SERF1A-201ENST00000317633 TEKT1Q969V4 418 aa25.15■■□□□ 1.62
SERF1A-201ENST00000317633 R3HDMLQ9H3Y0 253 aa25.15■■□□□ 1.62
SERF1A-201ENST00000317633 SMC4Q9NTJ3 1288 aa25.15■■□□□ 1.62
SERF1A-201ENST00000317633 MYH13Q9UKX3 1938 aa25.15■■□□□ 1.62
SERF1A-201ENST00000317633 OTOFQ9HC10 1997 aa25.14■■□□□ 1.62
SERF1A-201ENST00000317633 BCAMP50895 628 aa25.14■■□□□ 1.62
SERF1A-201ENST00000317633 MRIQ9BWK5 157 aa25.14■■□□□ 1.62
SERF1A-201ENST00000317633 SUGT1Q9Y2Z0 365 aa25.14■■□□□ 1.62
SERF1A-201ENST00000317633 MAST3O60307 1309 aa25.13■■□□□ 1.61
SERF1A-201ENST00000317633 IGF2BP3O00425 579 aaKnown RBP eCLIP25.13■■□□□ 1.61
SERF1A-201ENST00000317633 TEPSINQ96N21 525 aa25.13■■□□□ 1.61
SERF1A-201ENST00000317633 TMOD2Q9NZR1 351 aa25.13■■□□□ 1.61
SERF1A-201ENST00000317633 EYA2O00167 538 aa25.12■■□□□ 1.61
SERF1A-201ENST00000317633 CT47B1P0C2W7 299 aaPredicted RBP25.12■■□□□ 1.61
SERF1A-201ENST00000317633 GRIK5Q16478 980 aa25.12■■□□□ 1.61
SERF1A-201ENST00000317633 TMEM39BQ9GZU3 492 aa25.12■■□□□ 1.61
SERF1A-201ENST00000317633 ELP3Q9H9T3 547 aa25.12■■□□□ 1.61
SERF1A-201ENST00000317633 SLC5A1P13866 664 aa25.11■■□□□ 1.61
SERF1A-201ENST00000317633 FGFR2P21802 821 aa25.11■■□□□ 1.61
SERF1A-201ENST00000317633 OPTNQ96CV9 577 aa25.11■■□□□ 1.61
SERF1A-201ENST00000317633 CDCA7LQ96GN5 454 aa25.11■■□□□ 1.61
SERF1A-201ENST00000317633 TESPA1A2RU30 521 aaPredicted RBP25.1■■□□□ 1.61
SERF1A-201ENST00000317633 GJA5P36382 358 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 MAP3K9P80192 1104 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 LPIN2Q92539 896 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 HOOK2Q96ED9 719 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 ZDHHC15Q96MV8 337 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 FBXO3Q9UK99 471 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 HDAC5Q9UQL6 1122 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 CSADQ9Y600 493 aa25.1■■□□□ 1.61
SERF1A-201ENST00000317633 PDE4DIPQ5VU43 2346 aa25.09■■□□□ 1.61
SERF1A-201ENST00000317633 UBTFL1P0CB47 393 aaPredicted RBP25.09■■□□□ 1.61
SERF1A-201ENST00000317633 RFX5P48382 616 aaPredicted RBP25.09■■□□□ 1.61
SERF1A-201ENST00000317633 WDR66Q8TBY9 1149 aa25.09■■□□□ 1.61
SERF1A-201ENST00000317633 ERO1AQ96HE7 468 aa25.09■■□□□ 1.61
SERF1A-201ENST00000317633 FKBP1CQ5VVH2 108 aa25.08■■□□□ 1.61
SERF1A-201ENST00000317633 HHIPL2Q6UWX4 724 aa25.08■■□□□ 1.61
SERF1A-201ENST00000317633 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.08■■□□□ 1.61
SERF1A-201ENST00000317633 FAM83AQ86UY5 434 aa25.08■■□□□ 1.61
SERF1A-201ENST00000317633 TRMT2AQ8IZ69 625 aaKnown RBP25.08■■□□□ 1.61
SERF1A-201ENST00000317633 TRIM17Q9Y577 477 aa25.08■■□□□ 1.61
SERF1A-201ENST00000317633 CDAN1Q8IWY9 1227 aa25.07■■□□□ 1.6
SERF1A-201ENST00000317633 CACNB3P54284 484 aa25.06■■□□□ 1.6
SERF1A-201ENST00000317633 CRHR2Q13324 411 aa25.06■■□□□ 1.6
SERF1A-201ENST00000317633 VGLL4Q14135 290 aa25.06■■□□□ 1.6
SERF1A-201ENST00000317633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.06■■□□□ 1.6
SERF1A-201ENST00000317633 API5Q9BZZ5 524 aaKnown RBP25.06■■□□□ 1.6
SERF1A-201ENST00000317633 TNRC18O15417 2968 aaPredicted RBP25.05■■□□□ 1.6
SERF1A-201ENST00000317633 CIAO1O76071 339 aa25.05■■□□□ 1.6
SERF1A-201ENST00000317633 GTF2A2P52657 109 aa25.05■■□□□ 1.6
SERF1A-201ENST00000317633 APOBEC3HQ6NTF7 200 aaKnown RBP25.05■■□□□ 1.6
SERF1A-201ENST00000317633 OTOP1Q7RTM1 612 aa25.05■■□□□ 1.6
SERF1A-201ENST00000317633 ATG9AQ7Z3C6 839 aa25.05■■□□□ 1.6
SERF1A-201ENST00000317633 PTPN18Q99952 460 aa25.05■■□□□ 1.6
SERF1A-201ENST00000317633 GNL3LQ9NVN8 582 aaKnown RBP25.05■■□□□ 1.6
SERF1A-201ENST00000317633 CEP126Q9P2H0 1117 aa25.05■■□□□ 1.6
SERF1A-201ENST00000317633 NOB1Q9ULX3 412 aaKnown RBP25.05■■□□□ 1.6
SERF1A-201ENST00000317633 MS4A4AQ96JQ5 239 aa25.04■■□□□ 1.6
SERF1A-201ENST00000317633 CCL15-CCL14A0A0B4J2E2 113 aa25.03■■□□□ 1.6
SERF1A-201ENST00000317633 SP3Q02447 781 aa25.03■■□□□ 1.6
SERF1A-201ENST00000317633 CCL15Q16663 113 aa25.03■■□□□ 1.6
SERF1A-201ENST00000317633 ATP2B3Q16720 1220 aa25.03■■□□□ 1.6
SERF1A-201ENST00000317633 DCAF15Q66K64 600 aa25.03■■□□□ 1.6
SERF1A-201ENST00000317633 SIL1Q9H173 461 aa25.03■■□□□ 1.6
SERF1A-201ENST00000317633 AK9Q5TCS8 1911 aa25.02■■□□□ 1.6
SERF1A-201ENST00000317633 WDHD1O75717 1129 aaPredicted RBP25.02■■□□□ 1.6
SERF1A-201ENST00000317633 CD99L2Q8TCZ2 262 aa25.02■■□□□ 1.6
SERF1A-201ENST00000317633 OTUD5Q96G74 571 aa25.02■■□□□ 1.6
SERF1A-201ENST00000317633 RPAP1Q9BWH6 1393 aaPredicted RBP25.02■■□□□ 1.6
SERF1A-201ENST00000317633 SPDYE5A6NIY4 337 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 IL15P40933 162 aaPredicted RBP25.01■■□□□ 1.59
SERF1A-201ENST00000317633 ARHGEF6Q15052 776 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 INTS3Q68E01 1043 aaKnown RBP25.01■■□□□ 1.59
SERF1A-201ENST00000317633 CNKSR2Q8WXI2 1034 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 BRI3BPQ8WY22 251 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 WRNIP1Q96S55 665 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 EFCC1Q9HA90 598 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 ZFYVE28Q9HCC9 887 aa25.01■■□□□ 1.59
SERF1A-201ENST00000317633 TAF1CQ15572 869 aaPredicted RBP25■■□□□ 1.59
SERF1A-201ENST00000317633 ERO1BQ86YB8 467 aa25■■□□□ 1.59
SERF1A-201ENST00000317633 PTPN22Q9Y2R2 807 aa25■■□□□ 1.59
SERF1A-201ENST00000317633 LRRFIP2Q9Y608 721 aaKnown RBP25■■□□□ 1.59
SERF1A-201ENST00000317633 CCER2I3L3R5 266 aa24.99■■□□□ 1.59
SERF1A-201ENST00000317633 SEMA3EO15041 775 aa24.99■■□□□ 1.59
SERF1A-201ENST00000317633 SLC34A2O95436 690 aa24.99■■□□□ 1.59
SERF1A-201ENST00000317633 DENND2AQ9ULE3 1009 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms