RNA–Protein interactions for RNA: ENST00000295896.12

C3orf49-201, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS P5 TSL 2 BASIC

Gene C3orf49, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-201ENST00000295896 SCARA3Q6AZY7 606 aa11.54□□□□□ -0.56
C3orf49-201ENST00000295896 KANK3Q6NY19 840 aa11.54□□□□□ -0.56
C3orf49-201ENST00000295896 ADAMTSL4Q6UY14 1074 aa11.54□□□□□ -0.56
C3orf49-201ENST00000295896 FAM196AQ6ZSG2 479 aa11.54□□□□□ -0.56
C3orf49-201ENST00000295896 DPH6Q7L8W6 267 aa11.54□□□□□ -0.56
C3orf49-201ENST00000295896 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
C3orf49-201ENST00000295896 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
C3orf49-201ENST00000295896 EPHA1P21709 976 aa11.53□□□□□ -0.56
C3orf49-201ENST00000295896 BMP6P22004 513 aa11.53□□□□□ -0.56
C3orf49-201ENST00000295896 SOX9P48436 509 aa11.53□□□□□ -0.56
C3orf49-201ENST00000295896 NASPP49321 788 aaPredicted RBP11.53□□□□□ -0.56
C3orf49-201ENST00000295896 SRSF11Q05519 484 aaKnown RBP11.53□□□□□ -0.56
C3orf49-201ENST00000295896 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
C3orf49-201ENST00000295896 SOX17Q9H6I2 414 aaPredicted RBP11.53□□□□□ -0.56
C3orf49-201ENST00000295896 EFR3BQ9Y2G0 817 aa11.53□□□□□ -0.56
C3orf49-201ENST00000295896 ARNTP27540 789 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 NKD1Q969G9 470 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 LRRC3Q9BY71 257 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 GINM1Q9NU53 330 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 UBP1Q9NZI7 540 aa11.52□□□□□ -0.57
C3orf49-201ENST00000295896 EPXP11678 715 aa11.51□□□□□ -0.57
C3orf49-201ENST00000295896 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
C3orf49-201ENST00000295896 SLC16A10Q8TF71 515 aa11.51□□□□□ -0.57
C3orf49-201ENST00000295896 NUDT8Q8WV74 236 aa11.51□□□□□ -0.57
C3orf49-201ENST00000295896 GATAD2BQ8WXI9 593 aa11.51□□□□□ -0.57
C3orf49-201ENST00000295896 LNPKQ9C0E8 428 aa11.51□□□□□ -0.57
C3orf49-201ENST00000295896 JPH1Q9HDC5 661 aaPredicted RBP11.51□□□□□ -0.57
C3orf49-201ENST00000295896 MPP2Q14168 576 aa11.5□□□□□ -0.57
C3orf49-201ENST00000295896 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
C3orf49-201ENST00000295896 SLITRK4Q8IW52 837 aa11.5□□□□□ -0.57
C3orf49-201ENST00000295896 WNT8BQ93098 351 aa11.5□□□□□ -0.57
C3orf49-201ENST00000295896 CBX8Q9HC52 389 aa11.5□□□□□ -0.57
C3orf49-201ENST00000295896 STARD13Q9Y3M8 1113 aa11.5□□□□□ -0.57
C3orf49-201ENST00000295896 ARL4DP49703 201 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 GRIK5Q16478 980 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 RNFT1Q5M7Z0 435 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 C20orf204Q6ZNR8 217 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 IL22RA1Q8N6P7 574 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 PPME1Q9Y570 386 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 PCDHB5Q9Y5E4 795 aa11.49□□□□□ -0.57
C3orf49-201ENST00000295896 SOX1O00570 391 aaPredicted RBP11.48□□□□□ -0.57
C3orf49-201ENST00000295896 F13A1P00488 732 aa11.48□□□□□ -0.57
C3orf49-201ENST00000295896 CRKP46108 304 aa11.48□□□□□ -0.57
C3orf49-201ENST00000295896 PIP4K2BP78356 416 aa11.48□□□□□ -0.57
C3orf49-201ENST00000295896 CWF19L2Q2TBE0 894 aaKnown RBP11.48□□□□□ -0.57
C3orf49-201ENST00000295896 RASIP1Q5U651 963 aa11.48□□□□□ -0.57
C3orf49-201ENST00000295896 BNC2Q6ZN30 1099 aaPredicted RBP11.48□□□□□ -0.57
C3orf49-201ENST00000295896 CKAP2LQ8IYA6 745 aa11.48□□□□□ -0.57
C3orf49-201ENST00000295896 LILRB5O75023 590 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 ALBP02768 609 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 ZNF252P-AS1Q0IIN9 211 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 STK35Q8TDR2 534 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
C3orf49-201ENST00000295896 FAM221AA4D161 298 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 TERTO14746 1132 aaKnown RBP11.46□□□□□ -0.57
C3orf49-201ENST00000295896 TRIM37O94972 964 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 BPNT1O95861 308 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
C3orf49-201ENST00000295896 C19orf57Q0VDD7 668 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 SEPT6Q14141 434 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 PDZD3Q86UT5 571 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 CPLX3Q8WVH0 158 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 JARID2Q92833 1246 aaPredicted RBP11.46□□□□□ -0.57
C3orf49-201ENST00000295896 IRF7Q92985 503 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 GAL3ST3Q96A11 431 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.57
C3orf49-201ENST00000295896 CILPO75339 1184 aa11.45□□□□□ -0.58
C3orf49-201ENST00000295896 GSTP1P09211 210 aaKnown RBP11.45□□□□□ -0.58
C3orf49-201ENST00000295896 BAG6P46379 1132 aa11.45□□□□□ -0.58
C3orf49-201ENST00000295896 AFF1P51825 1210 aaKnown RBP11.45□□□□□ -0.58
C3orf49-201ENST00000295896 SEZ6Q53EL9 994 aa11.45□□□□□ -0.58
C3orf49-201ENST00000295896 NOP9Q86U38 636 aaKnown RBP11.45□□□□□ -0.58
C3orf49-201ENST00000295896 ACDQ96AP0 544 aa11.45□□□□□ -0.58
C3orf49-201ENST00000295896 ZNF408Q9H9D4 720 aa11.45□□□□□ -0.58
C3orf49-201ENST00000295896 TLR3O15455 904 aaKnown RBP11.44□□□□□ -0.58
C3orf49-201ENST00000295896 ADAMTS2O95450 1211 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 CYP11A1P05108 521 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 GSTM4Q03013 218 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 WFDC8Q8IUA0 241 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 SLC7A3Q8WY07 619 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 SRRTQ9BXP5 876 aaKnown RBP11.44□□□□□ -0.58
C3orf49-201ENST00000295896 LRRC4BQ9NT99 713 aa11.44□□□□□ -0.58
C3orf49-201ENST00000295896 M0R082 166 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 ZNF165P49910 485 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 CCDC144BQ3MJ40 725 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 CHSY3Q70JA7 882 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 REC114Q7Z4M0 266 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 FBXO27Q8NI29 283 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 ZNF417Q8TAU3 575 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 ZNF587Q96SQ5 575 aaPredicted RBP11.43□□□□□ -0.58
C3orf49-201ENST00000295896 OSBPL2Q9H1P3 480 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 PRDM6Q9NQX0 595 aa11.43□□□□□ -0.58
C3orf49-201ENST00000295896 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
C3orf49-201ENST00000295896 CDC25BP30305 580 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms