RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CCDC66A2RUB6 948 aa12.83□□□□□ -0.35
USP6NL-201ENST00000277575 ATP5JP18859 108 aa12.83□□□□□ -0.35
USP6NL-201ENST00000277575 TYRO3Q06418 890 aa12.83□□□□□ -0.35
USP6NL-201ENST00000277575 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.35
USP6NL-201ENST00000277575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.358e-7■■□□□ 12.4
USP6NL-201ENST00000277575 ERVK-7P63135 1459 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
USP6NL-201ENST00000277575 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 TMCO5BA8MYB1 307 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 CCDC186Q7Z3E2 898 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 NCOA5Q9HCD5 579 aaKnown RBP12.83□□□□□ -0.36
USP6NL-201ENST00000277575 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 SNW1Q13573 536 aaKnown RBP12.83□□□□□ -0.36
USP6NL-201ENST00000277575 IQUBQ8NA54 791 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 SPATA5Q8NB90 893 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
USP6NL-201ENST00000277575 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP6NL-201ENST00000277575 UGGT1Q9NYU2 1555 aa12.83□□□□□ -0.36
USP6NL-201ENST00000277575 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 GNG11P61952 73 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 PLEKHF1Q96S99 279 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 MMRN2Q9H8L6 949 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 PLS1Q14651 629 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 ATL3Q6DD88 541 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 CFAP74Q9C0B2 1584 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 EAF2Q96CJ1 260 aaPredicted RBP12.82□□□□□ -0.36
USP6NL-201ENST00000277575 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
USP6NL-201ENST00000277575 H0YIN7 160 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 MAP9Q49MG5 647 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 RILPL1Q5EBL4 403 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 DEXIO95424 95 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 SKILP12757 684 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 CTSWP56202 376 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 USP37Q86T82 979 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 PUF60Q9UHX1 559 aaKnown RBP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 LLPHQ9BRT6 129 aaKnown RBP12.81□□□□□ -0.36
USP6NL-201ENST00000277575 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
USP6NL-201ENST00000277575 KDM5AP29375 1690 aaKnown RBP12.8□□□□□ -0.36
USP6NL-201ENST00000277575 NLRP1Q9C000 1473 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 GSTTP1A0A1W2PQM5 241 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 APBA3O96018 575 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 LETM2Q2VYF4 491 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 MAST3O60307 1309 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-201ENST00000277575 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 KRT13P13646 458 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 EIF6P56537 245 aaKnown RBP12.8□□□□□ -0.36
USP6NL-201ENST00000277575 STX17P56962 302 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 FAM173BQ6P4H8 233 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 B4DLN1 442 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 PRPF4BQ13523 1007 aaKnown RBP12.8□□□□□ -0.36
USP6NL-201ENST00000277575 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 ZNF830Q96NB3 372 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-201ENST00000277575 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 KDRP35968 1356 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 CCDC172P0C7W6 258 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 ZNF174Q15697 407 aa12.8□□□□□ -0.36
USP6NL-201ENST00000277575 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
USP6NL-201ENST00000277575 TTC37Q6PGP7 1564 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-201ENST00000277575 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 PLIN2Q99541 437 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 KIAA0754O94854 1291 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 PCCAP05165 728 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-201ENST00000277575 MCM3P25205 808 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 HSPA4P34932 840 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 MYOM2P54296 1465 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 SIK1P57059 783 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
USP6NL-201ENST00000277575 USP6P35125 1406 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-201ENST00000277575 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
USP6NL-201ENST00000277575 JADE2Q9NQC1 790 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 KDM6BO15054 1643 aa12.79□□□□□ -0.36
USP6NL-201ENST00000277575 CTNNA2P26232 953 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 NAA15Q9BXJ9 866 aaKnown RBP12.78□□□□□ -0.36
USP6NL-201ENST00000277575 GBP2P32456 591 aaPredicted RBP12.78□□□□□ -0.36
USP6NL-201ENST00000277575 HLTFQ14527 1009 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP6NL-201ENST00000277575 TBC1D22AQ8WUA7 517 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 MYL10Q9BUA6 226 aa12.78□□□□□ -0.36
USP6NL-201ENST00000277575 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms