RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 APBA3O96018 575 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 PLA2G4DQ86XP0 818 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 HAUS7Q99871 368 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 NPHP1O15259 732 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 DMTNQ08495 405 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 STK3Q13188 491 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.9■□□□□ 0.78
FOXA1-201ENST00000250448 DRC7Q8IY82 874 aa19.9■□□□□ 0.78
FOXA1-201ENST00000250448 IFIT1P09914 478 aaKnown RBP19.89■□□□□ 0.78
FOXA1-201ENST00000250448 BRD2P25440 801 aaKnown RBP19.89■□□□□ 0.78
FOXA1-201ENST00000250448 CBX1P83916 185 aa19.89■□□□□ 0.78
FOXA1-201ENST00000250448 FKBP4Q02790 459 aaKnown RBP eCLIP19.89■□□□□ 0.78
FOXA1-201ENST00000250448 UTP14CQ5TAP6 766 aaKnown RBP19.89■□□□□ 0.78
FOXA1-201ENST00000250448 ZNF589Q86UQ0 364 aaPredicted RBP19.89■□□□□ 0.78
FOXA1-201ENST00000250448 VGLL2Q8N8G2 317 aa19.89■□□□□ 0.78
FOXA1-201ENST00000250448 SPEF2Q9C093 1822 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 C4AP0C0L4 1744 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 TULP1O00294 542 aaPredicted RBP19.89■□□□□ 0.77
FOXA1-201ENST00000250448 TSGA10IPQ3SY00 556 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 SEC62Q99442 399 aaKnown RBP19.89■□□□□ 0.77
FOXA1-201ENST00000250448 TRIM5Q9C035 493 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 AKAP2Q9Y2D5 859 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 WTIPA6NIX2 430 aaPredicted RBP19.89■□□□□ 0.77
FOXA1-201ENST00000250448 ZSCAN20P17040 1043 aaPredicted RBP19.89■□□□□ 0.77
FOXA1-201ENST00000250448 LRMPQ12912 555 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 TTC39AQ5SRH9 613 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 BICD2Q8TD16 824 aa19.89■□□□□ 0.77
FOXA1-201ENST00000250448 PDE8BO95263 885 aa19.88■□□□□ 0.77
FOXA1-201ENST00000250448 NFIXQ14938 502 aa19.88■□□□□ 0.77
FOXA1-201ENST00000250448 PGBD1Q96JS3 809 aa19.88■□□□□ 0.77
FOXA1-201ENST00000250448 NR1I2O75469 434 aa19.88■□□□□ 0.77
FOXA1-201ENST00000250448 PAG1Q9NWQ8 432 aa19.88■□□□□ 0.77
FOXA1-201ENST00000250448 NRBP1Q9UHY1 535 aa19.87■□□□□ 0.77
FOXA1-201ENST00000250448 RESTQ13127 1097 aa19.87■□□□□ 0.77
FOXA1-201ENST00000250448 ZSCAN25Q6NSZ9 544 aa19.87■□□□□ 0.77
FOXA1-201ENST00000250448 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
FOXA1-201ENST00000250448 GTF3C6Q969F1 213 aa19.87■□□□□ 0.77
FOXA1-201ENST00000250448 JAK2O60674 1132 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 ZNF165P49910 485 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 CCDC158Q5M9N0 1113 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 SLC51AQ86UW1 340 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 DNAJC25Q9H1X3 360 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 IGHMBP2P38935 993 aaKnown RBP19.86■□□□□ 0.77
FOXA1-201ENST00000250448 KRT32Q14532 448 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 SLC27A3Q5K4L6 730 aa19.86■□□□□ 0.77
FOXA1-201ENST00000250448 CELF1Q92879 486 aaKnown RBP19.85■□□□□ 0.77
FOXA1-201ENST00000250448 BRF1Q92994 677 aa19.85■□□□□ 0.77
FOXA1-201ENST00000250448 ZNF827Q17R98 1081 aa19.85■□□□□ 0.77
FOXA1-201ENST00000250448 C16orf45Q96MC5 204 aaPredicted RBP19.85■□□□□ 0.77
FOXA1-201ENST00000250448 UBR3Q6ZT12 1888 aa19.85■□□□□ 0.77
FOXA1-201ENST00000250448 SMTNL1A8MU46 457 aa19.85■□□□□ 0.77
FOXA1-201ENST00000250448 PHKA1P46020 1223 aa19.85■□□□□ 0.77
FOXA1-201ENST00000250448 TPTE2Q6XPS3 522 aa19.85■□□□□ 0.77
FOXA1-201ENST00000250448 GYS1P13807 737 aa19.84■□□□□ 0.77
FOXA1-201ENST00000250448 ZAP70P43403 619 aa19.84■□□□□ 0.77
FOXA1-201ENST00000250448 KBTBD3Q8NAB2 608 aa19.84■□□□□ 0.77
FOXA1-201ENST00000250448 NYXQ9GZU5 481 aa19.84■□□□□ 0.77
FOXA1-201ENST00000250448 CLIP2Q9UDT6 1046 aa19.84■□□□□ 0.77
FOXA1-201ENST00000250448 MYH15Q9Y2K3 1946 aa19.83■□□□□ 0.77
FOXA1-201ENST00000250448 CAVIN2O95810 425 aa19.83■□□□□ 0.77
FOXA1-201ENST00000250448 CDC25BP30305 580 aa19.83■□□□□ 0.77
FOXA1-201ENST00000250448 CHRNDQ07001 517 aa19.83■□□□□ 0.77
FOXA1-201ENST00000250448 HSP90B1P14625 803 aaKnown RBP19.83■□□□□ 0.76
FOXA1-201ENST00000250448 MCAMP43121 646 aa19.83■□□□□ 0.76
FOXA1-201ENST00000250448 SAMD1Q6SPF0 538 aaPredicted RBP19.83■□□□□ 0.76
FOXA1-201ENST00000250448 NEK1Q96PY6 1258 aa19.83■□□□□ 0.76
FOXA1-201ENST00000250448 TFCP2L1Q9NZI6 479 aa19.83■□□□□ 0.76
FOXA1-201ENST00000250448 LAMB2P55268 1798 aa19.83■□□□□ 0.76
FOXA1-201ENST00000250448 MROH5Q6ZUA9 1318 aa19.83■□□□□ 0.76
FOXA1-201ENST00000250448 GOLGB1Q14789 3259 aaKnown RBP19.83■□□□□ 0.76
FOXA1-201ENST00000250448 CASZ1Q86V15 1759 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 NCBP1Q09161 790 aaKnown RBP19.82■□□□□ 0.76
FOXA1-201ENST00000250448 SF3B3Q15393 1217 aaKnown RBP19.82■□□□□ 0.76
FOXA1-201ENST00000250448 PUM3Q15397 648 aaKnown RBP19.82■□□□□ 0.76
FOXA1-201ENST00000250448 SYCP1Q15431 976 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 H3BQV1 296 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 TNNT1P13805 278 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.764e-7■□□□□ 8.2
FOXA1-201ENST00000250448 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 ANKRD18AQ8IVF6 992 aa19.82■□□□□ 0.76
FOXA1-201ENST00000250448 ZSCAN16Q9H4T2 348 aaPredicted RBP19.82■□□□□ 0.76
FOXA1-201ENST00000250448 SLC10A5Q5PT55 438 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CCDC102BQ68D86 513 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CACTINQ8WUQ7 758 aaKnown RBP19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CDC5LQ99459 802 aaKnown RBP19.81■□□□□ 0.76
FOXA1-201ENST00000250448 GTPBP4Q9BZE4 634 aaKnown RBP19.81■□□□□ 0.76
FOXA1-201ENST00000250448 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
FOXA1-201ENST00000250448 LRP5O75197 1615 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 SPDYE4A6NLX3 237 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 Q6ZUG5 572 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 RFX7Q2KHR2 1363 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 FGFR2P21802 821 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CCDC144BQ3MJ40 725 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CCDC144CPQ8IYA2 1237 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CFAP45Q9UL16 551 aa19.81■□□□□ 0.76
FOXA1-201ENST00000250448 IQSEC3Q9UPP2 1182 aaPredicted RBP19.81■□□□□ 0.76
FOXA1-201ENST00000250448 CNBD1Q8NA66 436 aa19.8■□□□□ 0.76
FOXA1-201ENST00000250448 LPIN2Q92539 896 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms