RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 POLLQ9UGP5 575 aa27.74■■■□□ 2.03
SYNGR3-201ENST00000248121 LEMD3Q9Y2U8 911 aa27.74■■■□□ 2.03
SYNGR3-201ENST00000248121 GOLGA6L22H0YM25 854 aa27.73■■■□□ 2.03
SYNGR3-201ENST00000248121 GPAA1O43292 621 aa27.73■■■□□ 2.03
SYNGR3-201ENST00000248121 PTMSP20962 102 aa27.73■■■□□ 2.03
SYNGR3-201ENST00000248121 ZNF622Q969S3 477 aaKnown RBP eCLIP27.73■■■□□ 2.03
SYNGR3-201ENST00000248121 MASTLQ96GX5 879 aa27.73■■■□□ 2.03
SYNGR3-201ENST00000248121 UBE3CQ15386 1083 aa27.72■■■□□ 2.03
SYNGR3-201ENST00000248121 ZSCAN25Q6NSZ9 544 aa27.72■■■□□ 2.03
SYNGR3-201ENST00000248121 SMC3Q9UQE7 1217 aa27.72■■■□□ 2.03
SYNGR3-201ENST00000248121 MAGEB6Q8N7X4 407 aa27.72■■■□□ 2.03
SYNGR3-201ENST00000248121 LMBRD1Q9NUN5 540 aa27.72■■■□□ 2.03
SYNGR3-201ENST00000248121 GNL3LQ9NVN8 582 aaKnown RBP27.72■■■□□ 2.03
SYNGR3-201ENST00000248121 E7EWF7 191 aa27.71■■■□□ 2.03
SYNGR3-201ENST00000248121 ATP6V0A2Q9Y487 856 aa27.71■■■□□ 2.03
SYNGR3-201ENST00000248121 Q6ZUG5 572 aa27.71■■■□□ 2.03
SYNGR3-201ENST00000248121 ABCF2Q9UG63 623 aa27.71■■■□□ 2.03
SYNGR3-201ENST00000248121 GGA1Q9UJY5 639 aa27.71■■■□□ 2.03
SYNGR3-201ENST00000248121 CHD4Q14839 1912 aa27.7■■■□□ 2.03
SYNGR3-201ENST00000248121 FGAP02671 866 aa27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 SP8Q8IXZ3 490 aa27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 TBC1D16Q8TBP0 767 aa27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 PODXL2Q9NZ53 605 aa27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 C10orf71Q711Q0 1435 aa27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 DLEC1Q9Y238 1755 aa27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 WDR33Q9C0J8 1336 aaKnown RBP27.7■■■□□ 2.02
SYNGR3-201ENST00000248121 ZBTB7AO95365 584 aa27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 SYT1P21579 422 aa27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 GJB2P29033 226 aa27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 SKOR2Q2VWA4 1001 aaPredicted RBP27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 DENND2AQ9ULE3 1009 aa27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 EXOSC10Q01780 885 aaKnown RBP27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 CHAF1AQ13111 956 aaPredicted RBP27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 DHX32Q7L7V1 743 aaKnown RBP27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 LRRC2Q9BYS8 371 aa27.69■■■□□ 2.02
SYNGR3-201ENST00000248121 HMGB1P09429 215 aaKnown RBP27.68■■■□□ 2.02
SYNGR3-201ENST00000248121 ADGRA1Q86SQ6 560 aa27.68■■■□□ 2.02
SYNGR3-201ENST00000248121 ZNF384Q8TF68 577 aa27.68■■■□□ 2.02
SYNGR3-201ENST00000248121 LRP2BPQ9P2M1 347 aa27.68■■■□□ 2.02
SYNGR3-201ENST00000248121 ATP2B4P23634 1241 aa27.68■■■□□ 2.02
SYNGR3-201ENST00000248121 MAP3K12Q12852 859 aa27.68■■■□□ 2.02
SYNGR3-201ENST00000248121 UPF1Q92900 1129 aaKnown RBP eCLIP27.68■■■□□ 2.027e-6■■■■□ 22.8
SYNGR3-201ENST00000248121 ALDH1B1P30837 517 aa27.67■■■□□ 2.02
SYNGR3-201ENST00000248121 CTNNA3Q9UI47 895 aa27.67■■■□□ 2.02
SYNGR3-201ENST00000248121 H0YIN7 160 aa27.66■■■□□ 2.02
SYNGR3-201ENST00000248121 STX6O43752 255 aa27.66■■■□□ 2.02
SYNGR3-201ENST00000248121 HAND2P61296 217 aa27.66■■■□□ 2.02
SYNGR3-201ENST00000248121 ZNF219Q9P2Y4 722 aaPredicted RBP27.66■■■□□ 2.02
SYNGR3-201ENST00000248121 CCDC88AQ3V6T2 1871 aa27.66■■■□□ 2.02
SYNGR3-201ENST00000248121 KIF13BQ9NQT8 1826 aa27.65■■■□□ 2.02
SYNGR3-201ENST00000248121 MAST2Q6P0Q8 1798 aa27.65■■■□□ 2.02
SYNGR3-201ENST00000248121 C6orf229H3BNL8 230 aa27.65■■■□□ 2.02
SYNGR3-201ENST00000248121 C15orf52Q6ZUT6 534 aaKnown RBP27.65■■■□□ 2.02
SYNGR3-201ENST00000248121 BRF1Q92994 677 aa27.65■■■□□ 2.02
SYNGR3-201ENST00000248121 AGXT2Q9BYV1 514 aa27.65■■■□□ 2.02
SYNGR3-201ENST00000248121 SEMA3EO15041 775 aa27.64■■■□□ 2.02
SYNGR3-201ENST00000248121 STK3Q13188 491 aa27.64■■■□□ 2.02
SYNGR3-201ENST00000248121 TMC4Q7Z404 712 aa27.64■■■□□ 2.02
SYNGR3-201ENST00000248121 RAI14Q9P0K7 980 aa27.64■■■□□ 2.02
SYNGR3-201ENST00000248121 TCHHQ07283 1943 aa27.64■■■□□ 2.02
SYNGR3-201ENST00000248121 PRPF40AO75400 957 aaKnown RBP27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 ZSCAN22P10073 491 aaPredicted RBP27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 PRDX5P30044 214 aa27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 IMMTQ16891 758 aaKnown RBP27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 KLHL40Q2TBA0 621 aa27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 TDRD7Q8NHU6 1098 aaKnown RBP27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 SLC16A10Q8TF71 515 aa27.64■■■□□ 2.01
SYNGR3-201ENST00000248121 R3HDM1Q15032 1099 aaKnown RBP27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 STYK1Q6J9G0 422 aa27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 MIGA1Q8NAN2 632 aa27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 ATF5Q9Y2D1 282 aaPredicted RBP27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 KIAA1551Q9HCM1 1747 aa27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 GTF3C6Q969F1 213 aa27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 STRBPQ96SI9 672 aaKnown RBP27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 DDX49Q9Y6V7 483 aaKnown RBP27.63■■■□□ 2.01
SYNGR3-201ENST00000248121 RIMBP2O15034 1052 aa27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 MBD4O95243 580 aa27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 GRIK5Q16478 980 aa27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 ZNF804AQ7Z570 1209 aa27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 CD209Q9NNX6 404 aa27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 MTMR6Q9Y217 621 aa27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 PDS5AQ29RF7 1337 aaKnown RBP27.62■■■□□ 2.01
SYNGR3-201ENST00000248121 NBPF3Q9H094 633 aa27.61■■■□□ 2.01
SYNGR3-201ENST00000248121 ARMT1Q9H993 441 aa27.61■■■□□ 2.01
SYNGR3-201ENST00000248121 CHST3Q7LGC8 479 aa27.61■■■□□ 2.01
SYNGR3-201ENST00000248121 LCORLQ8N3X6 602 aa27.61■■■□□ 2.01
SYNGR3-201ENST00000248121 MPNDQ8N594 471 aa27.61■■■□□ 2.01
SYNGR3-201ENST00000248121 FOXD4L6Q3SYB3 417 aaPredicted RBP27.6■■■□□ 2.01
SYNGR3-201ENST00000248121 FOXD4L3Q6VB84 417 aaPredicted RBP27.6■■■□□ 2.01
SYNGR3-201ENST00000248121 CYP7A1P22680 504 aa27.6■■■□□ 2.01
SYNGR3-201ENST00000248121 AIDAQ96BJ3 306 aa27.6■■■□□ 2.01
SYNGR3-201ENST00000248121 F13A1P00488 732 aa27.59■■■□□ 2.01
SYNGR3-201ENST00000248121 DPP8Q6V1X1 898 aaPredicted RBP27.59■■■□□ 2.01
SYNGR3-201ENST00000248121 FSD2A1L4K1 749 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 APOBRQ0VD83 1088 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 GPT2Q8TD30 523 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 NSUN4Q96CB9 384 aaKnown RBP27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 PSDA5PKW4 1024 aaPredicted RBP27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 ZNF213O14771 459 aa27.58■■■□□ 2.01
SYNGR3-201ENST00000248121 PRKAB2O43741 272 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms