RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 ERLIN2O94905 339 aa18.53■□□□□ 0.56
PDE1B-201ENST00000243052 AKAP17AQ02040 695 aaKnown RBP18.53■□□□□ 0.56
PDE1B-201ENST00000243052 MMS22LQ6ZRQ5 1243 aa18.53■□□□□ 0.56
PDE1B-201ENST00000243052 COPS6Q7L5N1 327 aa18.53■□□□□ 0.56
PDE1B-201ENST00000243052 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
PDE1B-201ENST00000243052 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
PDE1B-201ENST00000243052 RPS6KB1P23443 525 aa18.52■□□□□ 0.56
PDE1B-201ENST00000243052 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.56
PDE1B-201ENST00000243052 LRRC31Q6UY01 552 aa18.52■□□□□ 0.56
PDE1B-201ENST00000243052 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
PDE1B-201ENST00000243052 MRPS27Q92552 414 aaKnown RBP18.52■□□□□ 0.56
PDE1B-201ENST00000243052 RABGGTAQ92696 567 aa18.52■□□□□ 0.56
PDE1B-201ENST00000243052 ECM2O94769 699 aaPredicted RBP18.52■□□□□ 0.55
PDE1B-201ENST00000243052 ATP6V1AP38606 617 aa18.52■□□□□ 0.55
PDE1B-201ENST00000243052 ANKRD24Q8TF21 1146 aa18.52■□□□□ 0.55
PDE1B-201ENST00000243052 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
PDE1B-201ENST00000243052 VWA3AA6NCI4 1184 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
PDE1B-201ENST00000243052 TOGARAM2Q6ZUX3 1019 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 TADA2BQ86TJ2 420 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 LINS1Q8NG48 757 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 RAI14Q9P0K7 980 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 PLEKHG1Q9ULL1 1385 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 MON2Q7Z3U7 1717 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 HIP1O00291 1037 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 CCT5P48643 541 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 CORO7P57737 925 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 TTC19Q6DKK2 380 aaPredicted RBP18.51■□□□□ 0.55
PDE1B-201ENST00000243052 MAP4K1Q92918 833 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 ZNF396Q96N95 335 aaPredicted RBP18.51■□□□□ 0.55
PDE1B-201ENST00000243052 BAG1Q99933 345 aaPredicted RBP18.51■□□□□ 0.55
PDE1B-201ENST00000243052 CENPHQ9H3R5 247 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 MPHOSPH8Q99549 860 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 TM6SF1Q9BZW5 370 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 ZSCAN16Q9H4T2 348 aaPredicted RBP18.51■□□□□ 0.55
PDE1B-201ENST00000243052 KIAA1468Q9P260 1216 aa18.51■□□□□ 0.55
PDE1B-201ENST00000243052 CCDC151A5D8V7 595 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 TFCP2Q12800 502 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 ALDH1L1O75891 902 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 SETQ01105 290 aaPredicted RBP18.5■□□□□ 0.55
PDE1B-201ENST00000243052 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
PDE1B-201ENST00000243052 NEK1Q96PY6 1258 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
PDE1B-201ENST00000243052 JPH2Q9BR39 696 aaPredicted RBP18.5■□□□□ 0.55
PDE1B-201ENST00000243052 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.5■□□□□ 0.55
PDE1B-201ENST00000243052 RIN2Q8WYP3 895 aaPredicted RBP18.49■□□□□ 0.55
PDE1B-201ENST00000243052 CCDC85AQ96PX6 553 aaPredicted RBP18.49■□□□□ 0.55
PDE1B-201ENST00000243052 PCDHA7Q9UN72 937 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 PPARDQ03181 441 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 PNKPQ96T60 521 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 UBXN6Q9BZV1 441 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 MRFAP1Q9Y605 127 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 MARCKSP29966 332 aaPredicted RBP18.49■□□□□ 0.55
PDE1B-201ENST00000243052 MMP14P50281 582 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 GIMAP7Q8NHV1 300 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 PSD3Q9NYI0 1048 aa18.49■□□□□ 0.55
PDE1B-201ENST00000243052 MKRN1Q9UHC7 482 aaKnown RBP18.49■□□□□ 0.55
PDE1B-201ENST00000243052 TUBB4AP04350 444 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 PPP2R5AQ15172 486 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 FANCLQ9NW38 375 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 BABAM1Q9NWV8 329 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 GCP02774 474 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 CASP8Q14790 479 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 MTF1Q14872 753 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 ZNF569Q5MCW4 686 aa18.48■□□□□ 0.55
PDE1B-201ENST00000243052 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
PDE1B-201ENST00000243052 HSP90AB3PQ58FF7 597 aa18.47■□□□□ 0.55
PDE1B-201ENST00000243052 EFCAB13Q8IY85 973 aa18.47■□□□□ 0.55
PDE1B-201ENST00000243052 KAZALD1Q96I82 304 aa18.47■□□□□ 0.55
PDE1B-201ENST00000243052 GOLIM4O00461 696 aa18.47■□□□□ 0.55
PDE1B-201ENST00000243052 BRD3Q15059 726 aa18.47■□□□□ 0.55
PDE1B-201ENST00000243052 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 ATP2B2Q01814 1243 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 TTC5Q8N0Z6 440 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 RNF40O75150 1001 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 A0A087WZG4 1122 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 ARHGAP6O43182 974 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 SCRN1Q12765 414 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 ZNF622Q969S3 477 aaKnown RBP eCLIP18.46■□□□□ 0.55
PDE1B-201ENST00000243052 SAMM50Q9Y512 469 aa18.46■□□□□ 0.55
PDE1B-201ENST00000243052 ZMYND10O75800 440 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 IGKV5-2P06315 115 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 VSNL1P62760 191 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 RCOR1Q9UKL0 485 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 CBFA2T2O43439 604 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 BEND6Q5SZJ8 279 aaPredicted RBP18.45■□□□□ 0.54
PDE1B-201ENST00000243052 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
PDE1B-201ENST00000243052 SYNE3Q6ZMZ3 975 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 GBP6Q6ZN66 633 aa18.45■□□□□ 0.54
PDE1B-201ENST00000243052 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDE1B-201ENST00000243052 A0A087WUV0 522 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms