RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 GBP6Q6ZN66 633 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 CCDC8Q9H0W5 538 aaPredicted RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 HARSP12081 509 aaKnown RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 PLCG2P16885 1265 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 DCAF17Q5H9S7 520 aaPredicted RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 CCDC42Q96M95 316 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 UTP11Q9Y3A2 253 aaKnown RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 BAG1Q99933 345 aaPredicted RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 PNMA2Q9UL42 364 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 KIF1BO60333 1816 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 DUSP27Q5VZP5 1158 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 ZNF449Q6P9G9 518 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 TTC31Q49AM3 519 aaPredicted RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 SDCCAG3Q96C92 435 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 GJB2P29033 226 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 IRX4P78413 519 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 TSNAXIP1Q2TAA8 658 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 PPP4R4Q6NUP7 873 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 CNGA4Q8IV77 575 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 UBL4BQ8N7F7 174 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 NEK1Q96PY6 1258 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 HMG20BQ9P0W2 317 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 PPP2R1AP30153 589 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 MCM4P33991 863 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 NYXQ9GZU5 481 aa8.43□□□□□ -1.06
PRDM2-201ENST00000235372 SUDS3Q9H7L9 328 aaPredicted RBP8.43□□□□□ -1.06
PRDM2-201ENST00000235372 SPOPO43791 374 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 C4orf50Q6ZRC1 276 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 TXNDC9O14530 226 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 UBXN1Q04323 297 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 PDCD2Q16342 344 aaPredicted RBP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 CAPZA3Q96KX2 299 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 ZBTB43O43298 467 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 SF3A3Q12874 501 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 SKA2Q8WVK7 121 aaPredicted RBP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 ZKSCAN3Q9BRR0 538 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 EXOC7Q9UPT5 735 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 DKC1O60832 514 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 ADCY5O95622 1261 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 MAN1A1P33908 653 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 RAPGEF1Q13905 1077 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 LCA5Q86VQ0 697 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 PARD3BQ8TEW8 1205 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 RTL9Q8NET4 1388 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
PRDM2-201ENST00000235372 COG7P83436 770 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 PPP1R12CQ9BZL4 782 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 TRIM35Q9UPQ4 493 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 SPECC1L-ADORA2AF8WAN1 911 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 CYP7A1P22680 504 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 FBXW4P57775 412 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 MAP3K21Q5TCX8 1036 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 KRT222Q8N1A0 295 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 KCNG4Q8TDN1 519 aa8.42□□□□□ -1.06
PRDM2-201ENST00000235372 PPP4R1Q8TF05 950 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 SLC4A4Q9Y6R1 1079 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 DNAJC8O75937 253 aaPredicted RBP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 PYGLP06737 847 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 DNM2P50570 870 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 HAND2P61296 217 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 KIF22Q14807 665 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 WAPLQ7Z5K2 1190 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 GIGYF1O75420 1035 aaPredicted RBP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 P4HA1P13674 534 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 GNA11P29992 359 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 KRT2P35908 639 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 ZNF165P49910 485 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 POLA1P09884 1462 aaPredicted RBP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 CCDC169A6NNP5 214 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 ZNF365Q70YC5 407 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 SND1Q7KZF4 910 aaKnown RBP eCLIP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 RUFY3Q7L099 469 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 MIER3Q7Z3K6 550 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 SPDYE2BA6NHP3 402 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 SPDYE6P0CI01 402 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 CAPN2P17655 700 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 NUCB1Q02818 461 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 MRRFQ96E11 262 aaKnown RBP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 SYF2O95926 243 aaKnown RBP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 S100BP04271 92 aaPredicted RBP8.41□□□□□ -1.06
PRDM2-201ENST00000235372 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 ANO3Q9BYT9 981 aa8.41□□□□□ -1.06
PRDM2-201ENST00000235372 CALUO43852 315 aaPredicted RBP8.4□□□□□ -1.06
PRDM2-201ENST00000235372 ALG1Q9BT22 464 aa8.4□□□□□ -1.06
PRDM2-201ENST00000235372 IPO11Q9UI26 975 aaKnown RBP8.4□□□□□ -1.06
PRDM2-201ENST00000235372 GINS2Q9Y248 185 aa8.4□□□□□ -1.06
PRDM2-201ENST00000235372 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.4□□□□□ -1.06
PRDM2-201ENST00000235372 ATP5J2-PTCD1G3V325 749 aa8.4□□□□□ -1.06
PRDM2-201ENST00000235372 BUB1BO60566 1050 aaPredicted RBP8.4□□□□□ -1.06
PRDM2-201ENST00000235372 PRPF6O94906 941 aaKnown RBP8.4□□□□□ -1.06
PRDM2-201ENST00000235372 PHEXP78562 749 aa8.4□□□□□ -1.06
PRDM2-201ENST00000235372 VWA3BQ502W6 1294 aa8.4□□□□□ -1.06
PRDM2-201ENST00000235372 B4GALNT4Q76KP1 1039 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms