RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 FZD1Q9UP38 647 aa19.92■□□□□ 0.78
ERCC1-201ENST00000013807 SUGT1Q9Y2Z0 365 aa19.92■□□□□ 0.78
ERCC1-201ENST00000013807 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
ERCC1-201ENST00000013807 GPR25O00155 361 aa19.91■□□□□ 0.78
ERCC1-201ENST00000013807 VPS37DQ86XT2 251 aa19.91■□□□□ 0.78
ERCC1-201ENST00000013807 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
ERCC1-201ENST00000013807 EYA2O00167 538 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 ZBTB22O15209 634 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 CRKP46108 304 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 IREB2P48200 963 aaKnown RBP19.9■□□□□ 0.78
ERCC1-201ENST00000013807 PUM3Q15397 648 aaKnown RBP19.9■□□□□ 0.78
ERCC1-201ENST00000013807 ANKRD13AQ8IZ07 590 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 KLHDC4Q8TBB5 520 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 WNK4Q96J92 1243 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 CLMNQ96JQ2 1002 aa19.9■□□□□ 0.78
ERCC1-201ENST00000013807 TDRD3Q9H7E2 651 aaKnown RBP19.9■□□□□ 0.78
ERCC1-201ENST00000013807 MKRN3Q13064 507 aaKnown RBP19.89■□□□□ 0.77
ERCC1-201ENST00000013807 GRIK5Q16478 980 aa19.89■□□□□ 0.77
ERCC1-201ENST00000013807 IFNL1Q8IU54 200 aa19.89■□□□□ 0.77
ERCC1-201ENST00000013807 SMC4Q9NTJ3 1288 aa19.89■□□□□ 0.77
ERCC1-201ENST00000013807 TESPA1A2RU30 521 aaPredicted RBP19.88■□□□□ 0.77
ERCC1-201ENST00000013807 BCAMP50895 628 aa19.88■□□□□ 0.77
ERCC1-201ENST00000013807 FKBP1CQ5VVH2 108 aa19.88■□□□□ 0.77
ERCC1-201ENST00000013807 ATG9AQ7Z3C6 839 aa19.88■□□□□ 0.77
ERCC1-201ENST00000013807 ZDHHC15Q96MV8 337 aa19.88■□□□□ 0.77
ERCC1-201ENST00000013807 CIAO1O76071 339 aa19.87■□□□□ 0.77
ERCC1-201ENST00000013807 IFIT1P09914 478 aaKnown RBP19.87■□□□□ 0.77
ERCC1-201ENST00000013807 TNNI2P48788 182 aa19.87■□□□□ 0.77
ERCC1-201ENST00000013807 LPIN2Q92539 896 aa19.87■□□□□ 0.77
ERCC1-201ENST00000013807 TEKT1Q969V4 418 aa19.87■□□□□ 0.77
ERCC1-201ENST00000013807 R3HDMLQ9H3Y0 253 aa19.87■□□□□ 0.77
ERCC1-201ENST00000013807 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
ERCC1-201ENST00000013807 MAST3O60307 1309 aa19.86■□□□□ 0.77
ERCC1-201ENST00000013807 FKTNO75072 461 aa19.86■□□□□ 0.77
ERCC1-201ENST00000013807 HHIPL2Q6UWX4 724 aa19.86■□□□□ 0.77
ERCC1-201ENST00000013807 ARHGAP45Q92619 1136 aa19.86■□□□□ 0.77
ERCC1-201ENST00000013807 API5Q9BZZ5 524 aaKnown RBP19.86■□□□□ 0.77
ERCC1-201ENST00000013807 NOB1Q9ULX3 412 aaKnown RBP19.86■□□□□ 0.77
ERCC1-201ENST00000013807 IQSEC3Q9UPP2 1182 aaPredicted RBP19.86■□□□□ 0.77
ERCC1-201ENST00000013807 FRAT2O75474 233 aaPredicted RBP19.85■□□□□ 0.77
ERCC1-201ENST00000013807 GJA5P36382 358 aa19.85■□□□□ 0.77
ERCC1-201ENST00000013807 APOBEC3HQ6NTF7 200 aaKnown RBP19.85■□□□□ 0.77
ERCC1-201ENST00000013807 FAM83AQ86UY5 434 aa19.85■□□□□ 0.77
ERCC1-201ENST00000013807 HPS5Q9UPZ3 1129 aa19.85■□□□□ 0.77
ERCC1-201ENST00000013807 IGF2BP3O00425 579 aaKnown RBP eCLIP19.84■□□□□ 0.77
ERCC1-201ENST00000013807 UBTFL1P0CB47 393 aaPredicted RBP19.84■□□□□ 0.77
ERCC1-201ENST00000013807 CHAF1AQ13111 956 aaPredicted RBP19.84■□□□□ 0.77
ERCC1-201ENST00000013807 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.84■□□□□ 0.77
ERCC1-201ENST00000013807 WDR66Q8TBY9 1149 aa19.84■□□□□ 0.77
ERCC1-201ENST00000013807 TMEM39BQ9GZU3 492 aa19.84■□□□□ 0.77
ERCC1-201ENST00000013807 TCP10L2B9ZVM9 353 aa19.83■□□□□ 0.77
ERCC1-201ENST00000013807 SLC5A1P13866 664 aa19.83■□□□□ 0.77
ERCC1-201ENST00000013807 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.77
ERCC1-201ENST00000013807 OTUD7BQ6GQQ9 843 aa19.83■□□□□ 0.77
ERCC1-201ENST00000013807 FBXO46Q6PJ61 603 aaPredicted RBP19.83■□□□□ 0.77
ERCC1-201ENST00000013807 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
ERCC1-201ENST00000013807 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.83■□□□□ 0.77
ERCC1-201ENST00000013807 MS4A4AQ96JQ5 239 aa19.83■□□□□ 0.77
ERCC1-201ENST00000013807 HTTP42858 3142 aa19.82■□□□□ 0.76
ERCC1-201ENST00000013807 PTPN18Q99952 460 aa19.82■□□□□ 0.76
ERCC1-201ENST00000013807 COPRSQ9NQ92 184 aa19.82■□□□□ 0.76
ERCC1-201ENST00000013807 RPAP1Q9BWH6 1393 aaPredicted RBP19.82■□□□□ 0.76
ERCC1-201ENST00000013807 AK9Q5TCS8 1911 aa19.81■□□□□ 0.76
ERCC1-201ENST00000013807 MYH2Q9UKX2 1941 aa19.81■□□□□ 0.76
ERCC1-201ENST00000013807 MAP3K9P80192 1104 aa19.81■□□□□ 0.76
ERCC1-201ENST00000013807 INTS3Q68E01 1043 aaKnown RBP19.81■□□□□ 0.76
ERCC1-201ENST00000013807 CEP126Q9P2H0 1117 aa19.81■□□□□ 0.76
ERCC1-201ENST00000013807 SALL1Q9NSC2 1324 aa19.8■□□□□ 0.76
ERCC1-201ENST00000013807 IL15P40933 162 aaPredicted RBP19.8■□□□□ 0.76
ERCC1-201ENST00000013807 OPTNQ96CV9 577 aa19.8■□□□□ 0.76
ERCC1-201ENST00000013807 HOOK2Q96ED9 719 aa19.8■□□□□ 0.76
ERCC1-201ENST00000013807 SEMA3EO15041 775 aa19.79■□□□□ 0.76
ERCC1-201ENST00000013807 VGLL4Q14135 290 aa19.79■□□□□ 0.76
ERCC1-201ENST00000013807 ATP2B3Q16720 1220 aa19.79■□□□□ 0.76
ERCC1-201ENST00000013807 ELP3Q9H9T3 547 aa19.79■□□□□ 0.76
ERCC1-201ENST00000013807 LRRFIP2Q9Y608 721 aaKnown RBP19.79■□□□□ 0.76
ERCC1-201ENST00000013807 KIAA0100Q14667 2235 aaKnown RBP19.79■□□□□ 0.76
ERCC1-201ENST00000013807 MTX1Q13505 466 aa19.78■□□□□ 0.76
ERCC1-201ENST00000013807 TMOD2Q9NZR1 351 aa19.78■□□□□ 0.76
ERCC1-201ENST00000013807 CENPFP49454 3210 aa19.78■□□□□ 0.76
ERCC1-201ENST00000013807 SPDYE5A6NIY4 337 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 GTF2A2P52657 109 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 CACNB3P54284 484 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 SOX10P56693 466 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 CRHR2Q13324 411 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 MEIS3Q99687 375 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 GNL3LQ9NVN8 582 aaKnown RBP19.77■□□□□ 0.76
ERCC1-201ENST00000013807 CSADQ9Y600 493 aa19.77■□□□□ 0.76
ERCC1-201ENST00000013807 RBBP6Q7Z6E9 1792 aaKnown RBP19.77■□□□□ 0.76
ERCC1-201ENST00000013807 GNAI3P08754 354 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 OTOP1Q7RTM1 612 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 ERO1BQ86YB8 467 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 FAM151AQ8WW52 585 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 ERO1AQ96HE7 468 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 SIL1Q9H173 461 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 DENND2AQ9ULE3 1009 aa19.76■□□□□ 0.75
ERCC1-201ENST00000013807 PDS5AQ29RF7 1337 aaKnown RBP19.76■□□□□ 0.75
ERCC1-201ENST00000013807 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
ERCC1-201ENST00000013807 BRI3BPQ8WY22 251 aa19.75■□□□□ 0.75
ERCC1-201ENST00000013807 ZCCHC17Q9NP64 241 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms