RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 SMARCC2Q8TAQ2 1214 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 TBC1D22AQ8WUA7 517 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 ESYT1Q9BSJ8 1104 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 SLC26A6Q9BXS9 759 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 DDX19AQ9NUU7 478 aaKnown RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 TMOD4Q9NZQ9 345 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 PRDM15P57071 1507 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 C2orf72A6NCS6 295 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 NEBLO76041 1014 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 CALML3P27482 149 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 TMC4Q7Z404 712 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 USP37Q86T82 979 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 QTRT2Q9H974 415 aaKnown RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 KDRP35968 1356 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 F8W031 263 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 SDSP20132 328 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 NMIQ13287 307 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 CCDC181Q5TID7 509 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 APBB1IPQ7Z5R6 666 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 GLT8D2Q9H1C3 349 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 SEPT11Q9NVA2 429 aaKnown RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 ORC3Q9UBD5 711 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 BLMP54132 1417 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 PLA2R1Q13018 1463 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 PER1O15534 1290 aaPredicted RBP4.87□□□□□ -1.63
CFTR-201ENST00000003084 GCKRQ14397 625 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 NIM1KQ8IY84 436 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 DNAJC5Q9H3Z4 198 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 ARHGEF10LQ9HCE6 1279 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 USP6P35125 1406 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 ERCC6L2Q5T890 1561 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 CCDC171Q6TFL3 1326 aa4.87□□□□□ -1.63
CFTR-201ENST00000003084 MAN1A2O60476 641 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 HSP90B2PQ58FF3 399 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 VARS2Q5ST30 1063 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 FAM117BQ6P1L5 589 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 CNNM3Q8NE01 707 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 LPIN2Q92539 896 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 TAF4BQ92750 862 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 VAT1LQ9HCJ6 419 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 CDC42BPAQ5VT25 1732 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 KLF18A0A0U1RQI7 1052 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 TBCAO75347 108 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 ARID4AP29374 1257 aaPredicted RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 EIF4A1P60842 406 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 CCT2P78371 535 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 CWF19L2Q2TBE0 894 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 Q3C1V9 767 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 MKNK1Q9BUB5 465 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 CBX8Q9HC52 389 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 CROCC2H7BZ55 1655 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 FDX1P10109 184 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 SKIP12755 728 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 ATP2B4P23634 1241 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 TMEM87AQ8NBN3 555 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 MCM9Q9NXL9 1143 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 RBM8AQ9Y5S9 174 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 ADGRL3Q9HAR2 1447 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 TNNI3KQ59H18 835 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 UNC5CLQ8IV45 518 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 RNF214Q8ND24 703 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 ZNF594Q96JF6 807 aaPredicted RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 AXIN2Q9Y2T1 843 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 LMTK2Q8IWU2 1503 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 EPB41L2O43491 1005 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 STX6O43752 255 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 CAVIN2O95810 425 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 PARP1P09874 1014 aaKnown RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 CCDC172P0C7W6 258 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 C7P10643 843 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 GNA11P29992 359 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 KRT2P35908 639 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 NAPAP54920 295 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 HAND2P61296 217 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 SPA17Q15506 151 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 GNASQ5JWF2 1037 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 TEX11Q8IYF3 940 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 FAM43AQ8N2R8 423 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 FERMT2Q96AC1 680 aa4.86□□□□□ -1.63
CFTR-201ENST00000003084 GPBP1L1Q9HC44 474 aaPredicted RBP4.86□□□□□ -1.63
CFTR-201ENST00000003084 PRC1O43663 620 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 NCBP1Q09161 790 aaKnown RBP4.85□□□□□ -1.63
CFTR-201ENST00000003084 MICU3Q86XE3 530 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 NLGN1Q8N2Q7 840 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 LARGE2Q8N3Y3 721 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 MPNDQ8N594 471 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 LZTS2Q9BRK4 669 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 STX8Q9UNK0 236 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 SAMM50Q9Y512 469 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 ROBO2Q9HCK4 1378 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 RIMBP3CA6NJZ7 1639 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 RIMBP3BA6NNM3 1639 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 RIMBP3Q9UFD9 1639 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 SPDYE3A6NKU9 549 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 IGHDP01880 384 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 CFHP08603 1231 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 TCIRG1Q13488 830 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 STX1AQ16623 288 aa4.85□□□□□ -1.63
CFTR-201ENST00000003084 TTLL5Q6EMB2 1281 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms