RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Sil1Q9EPK6 465 aa17.5■□□□□ 0.39
Trim11-203ENSMUST00000108810 Spata31d1bE9QA57 1361 aa17.5■□□□□ 0.39
Trim11-203ENSMUST00000108810 Rgs12Q8CGE9 1381 aa17.5■□□□□ 0.39
Trim11-203ENSMUST00000108810 Dhx16G3X8X0 1044 aaKnown RBP17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Tuft1O08970 390 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Znf326O88291 580 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 PtmaP26350 111 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Tpcn2Q8BWC0 731 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Gpr108Q91WD0 569 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Oas2E9Q9A9 742 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Lnx1O70263 728 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Slc4a4O88343 1079 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Ccdc174Q3U155 467 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Cep63Q3UPP8 700 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Krt84Q99M73 603 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 Zbtb22Q9Z0G7 638 aa17.49■□□□□ 0.39
Trim11-203ENSMUST00000108810 CrcpO35427 148 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Slurp2P0DP59 97 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Atxn2lQ7TQH0 1049 aaKnown RBP17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Ndufa8Q9DCJ5 172 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Krt85Q9Z2T6 507 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Sh3tc1G3X9F6 1346 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 NesQ6P5H2 1864 aaKnown RBP17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 FosbP13346 338 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Slc44a1Q6X893 653 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 R3hcc1Q8BSI6 488 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Rbm33Q9CXK9 1231 aaKnown RBP17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Cxcl11Q9JHH5 100 aa17.48■□□□□ 0.39
Trim11-203ENSMUST00000108810 Ankrd13dQ6PD24 605 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Kdm4aQ8BW72 1064 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Stag1Q9D3E6 1258 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 AfdnQ9QZQ1 1820 aaKnown RBP17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 CpdO89001 1377 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 A0A1W2P7S8 802 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Csrnp1P59054 583 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Agtpbp1Q641K1 1218 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Cdc5lQ6A068 802 aaKnown RBP17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Terf2ipQ91VL8 393 aa17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 SrrtQ99MR6 875 aaKnown RBP17.47■□□□□ 0.39
Trim11-203ENSMUST00000108810 Naaladl2A0A0N4SUJ3 795 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Mapkapk5O54992 473 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Cyp26a1O55127 497 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Cd3dP04235 173 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Q3TYL0 343 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Usp28Q5I043 1051 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Dock5B2RY04 1868 aa17.46■□□□□ 0.39
Trim11-203ENSMUST00000108810 Gm20425E9Q035 978 aaKnown RBP17.46■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ubap1lG3UW59 384 aa17.46■□□□□ 0.38
Trim11-203ENSMUST00000108810 SrprbP47758 269 aa17.46■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ppp1r21Q3TDD9 780 aa17.46■□□□□ 0.38
Trim11-203ENSMUST00000108810 Gm5592Q3V0A6 857 aa17.46■□□□□ 0.38
Trim11-203ENSMUST00000108810 U2af1l4Q8BGJ9 220 aa17.46■□□□□ 0.38
Trim11-203ENSMUST00000108810 Bnip3O55003 187 aa17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 Rbm26Q6NZN0 1012 aaKnown RBP17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ccdc82Q6PG04 518 aa17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 Casc1Q6TDU8 730 aa17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 Bola3Q8CEI1 110 aa17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 Sirt2Q8VDQ8 389 aa17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 Aox3G3X982 1335 aa17.45■□□□□ 0.38
Trim11-203ENSMUST00000108810 PrkcshO08795 521 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 CgnP59242 1191 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 LyarQ08288 388 aaKnown RBP17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Cnnm2Q3TWN3 875 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Zfp51Q3U4L8 781 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Bap1Q99PU7 728 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Pnpla6Q3TRM4 1355 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Dennd3A2RT67 1274 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 TrhQ62361 256 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Fam170aQ66LM6 333 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Rnf214Q8BFU3 668 aaKnown RBP17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Mtmr3Q8K296 1196 aa17.44■□□□□ 0.38
Trim11-203ENSMUST00000108810 Dynll1P63168 89 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Lins1Q3U1D0 764 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Myl10Q62082 202 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Mknk2Q8CDB0 459 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Akt1s1Q9D1F4 257 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Dydc2Q9D3X8 139 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Metap2O08663 478 aaKnown RBP17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 NfixP70257 488 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Llgl2Q3TJ91 1027 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Hps6Q8BLY7 805 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 VmacQ8BP01 174 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 DymQ8CHY3 669 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Paf1Q8K2T8 535 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Slc14a2Q8R4T9 930 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Pla2g12bQ99P27 195 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 1700018B08RikQ9DA83 213 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Rcan1Q9JHG6 198 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Letm1Q9Z2I0 738 aa17.43■□□□□ 0.38
Trim11-203ENSMUST00000108810 Adgra3Q7TT36 1310 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Pde11aP0C1Q2 933 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Pcmtd1P59913 357 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Fam83bQ0VBM2 1012 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Ckap2Q3V1H1 664 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Sumf1Q8R0F3 372 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 SdsQ8VBT2 327 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 MlphQ91V27 590 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 PdcQ9QW08 244 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 Snapc4Q8BP86 1333 aa17.42■□□□□ 0.38
Trim11-203ENSMUST00000108810 HelbQ6NVF4 1074 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms