RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 Acap3Q6NXL5 833 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Kcnq5Q9JK45 933 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Dnajc2P54103 621 aaKnown RBP15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Frat1P70339 274 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Gpatch3Q8BIY1 525 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Spata32Q8C5V0 334 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 SdsQ8VBT2 327 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Odf2lQ9D478 642 aa15.33■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Prl3d1P18121 224 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ica1lQ3TY65 431 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Washc4Q3UMB9 1173 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Pram1Q6BCL1 675 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Tmem59lQ7TNI2 337 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Plekho1Q9JIY0 408 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Shank3Q4ACU6 1730 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Arhgap4B1AUY3 965 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Trap1aP19473 224 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Esco1Q69Z69 843 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Fam53cQ8BXQ8 393 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Pcdhb15Q91Y04 786 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ube3bQ9ES34 1070 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 MetP16056 1379 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Carmil3Q3UFQ8 1375 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ssc5dQ8BV57 1371 aa15.32■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Lcmt1A0A0U1RNF2 332 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Hap1O35668 628 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 DymQ8CHY3 669 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Tomm22Q9CPQ3 142 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Zbtb43Q9DAI4 467 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Brwd3A2AHJ4 1799 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Kmt5bQ3U8K7 883 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ube2oQ6ZPJ3 1288 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Lrrc8aQ80WG5 810 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Susd4Q8BH32 490 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ginm1Q91WR6 327 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Bcl11bQ99PV8 884 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Col4a3bpQ9EQG9 624 aa15.31■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Lipo1J3QME6 396 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Myl10Q62082 202 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Arid5bQ8BM75 1188 aaKnown RBP15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Syt10Q9R0N4 523 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Zbtb21E9Q444 1094 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Me1P06801 572 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Plbd2Q3TCN2 594 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Arglu1Q3UL36 271 aaKnown RBP15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ankrd23Q812A3 306 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 CrcpO35427 148 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Paxbp1P58501 919 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ddb1Q3U1J4 1140 aaKnown RBP15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ifit1bl2Q3U687 466 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ccdc34Q3UI66 367 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Slc38a10Q5I012 1090 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Tpcn2Q8BWC0 731 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ubxn4Q8VCH8 506 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Stk38Q91VJ4 465 aa15.3■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Surf1P09925 306 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Dnaaf2Q8BPI1 814 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ccdc96Q9CR92 584 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Psrc1Q9D0P7 329 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Bicdl1A0JNT9 577 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Speer4dL7N216 212 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Agtpbp1Q641K1 1218 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Q8BT18 775 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Lrrc2Q8VDB8 371 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Osbpl5Q9ER64 874 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Clic4Q9QYB1 253 aa15.29■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Myh1Q5SX40 1942 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Prr29B1ARI9 187 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Cyp2c23E9Q5K4 494 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Snrpa1P57784 255 aaKnown RBP15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Tsen34Q8BMZ5 316 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ufl1Q8CCJ3 793 aaKnown RBP15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 NgdnQ9DB96 315 aaKnown RBP15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 IcoslgQ9JHJ8 322 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Setdb1O88974 1307 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Metap2O08663 478 aaKnown RBP15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Fkbp1aP26883 108 aaKnown RBP15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Tmem143Q8VD26 458 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Pcdhb22Q91XZ8 794 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Mapk8ip1Q9WVI9 707 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Cdc45Q9Z1X9 566 aa15.28■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Mast3Q3U214 1321 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Col22a1E9Q7P1 1613 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Cyp26a1O55127 497 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 NapbP28663 298 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Rtel1Q0VGM9 1203 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Srek1Q8BZX4 494 aaKnown RBP15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Klc3Q91W40 508 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Popdc2Q9ES82 367 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Ybx3Q9JKB3 361 aaKnown RBP15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Mroh6V9GX81 722 aa15.27■□□□□ 0.04
Col9a3-201ENSMUST00000103059 Lrriq3Q14DL3 633 aa15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Bsdc1Q80Y55 427 aa15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Acnat2Q8BGG9 420 aa15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Alx1Q8C8B0 326 aa15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Hps3Q91VB4 1002 aa15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Snw1Q9CSN1 536 aaKnown RBP15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Aox4Q3TYQ9 1336 aa15.27■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Cplx1P63040 134 aa15.26■□□□□ 0.03
Col9a3-201ENSMUST00000103059 Dnaaf4Q8R368 420 aa15.26■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms