RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 GabpaQ00422 454 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Ccdc162pQ0VG85 912 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Clec16aQ80U30 1036 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Micall1Q8BGT6 870 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Rapgef3Q8VCC8 918 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Gm5934D3Z4U6 212 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 AU019823E9PUQ3 292 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Klc3Q91W40 508 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Lmbr1lQ9D1E5 489 aa16.5■□□□□ 0.23
Chd4-201ENSMUST00000056889 Prr16A3KMN5 304 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Kif5aP33175 1027 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Hmgb1P63158 215 aaKnown RBP16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Sox13Q04891 613 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Frmd4bQ920B0 1035 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Ttc5Q99LG4 440 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 MthfsQ9D110 203 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Mcm5P49718 733 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Pdrg1P59048 133 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 SsbP32067 415 aaKnown RBP16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 GopcQ8BH60 463 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Sall3Q62255 1320 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Art2bO35975 289 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Dpf1Q9QX66 387 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Sorbs3Q9R1Z8 733 aa16.49■□□□□ 0.23
Chd4-201ENSMUST00000056889 Palm3A2TJV2 734 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 P4ha1Q60715 534 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 KaznQ69ZS8 779 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Stac3Q8BZ71 360 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Asic2Q925H0 512 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Mlh1Q9JK91 760 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Asxl1P59598 1514 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Taok1Q5F2E8 1001 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Pabpn1lQ5XFR0 273 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Enox2Q8R0Z2 598 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Cabp5Q9JLK3 173 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Fen1P39749 378 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Nsun2Q1HFZ0 757 aaKnown RBP16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Tcp11l1Q8BTG3 509 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Pdcd6ipQ9WU78 869 aaKnown RBP16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Terf1P70371 421 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Ifit2Q64112 472 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Krt13P08730 437 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 RestQ8VIG1 1082 aa16.48■□□□□ 0.23
Chd4-201ENSMUST00000056889 Sec63Q8VHE0 760 aaKnown RBP16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Pabpn1Q8CCS6 302 aaKnown RBP16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Wbp11Q923D5 641 aaKnown RBP16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Cnnm2Q3TWN3 875 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Hdac9Q99N13 588 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Acsl3Q9CZW4 720 aaKnown RBP16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Mdm2P23804 489 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Anks6Q6GQX6 883 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 CadpsQ80TJ1 1355 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Becn2P0DM65 447 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Birc2Q62210 612 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Cep85Q8BMK0 761 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Ccdc13D3YV10 709 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Kifc2O08672 792 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Rsad2Q8CBB9 362 aa16.47■□□□□ 0.23
Chd4-201ENSMUST00000056889 Arhgef5E9Q7D5 1581 aa16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Abtb2Q7TQI7 1024 aa16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Letm1Q9Z2I0 738 aa16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Fsip1Q9D3V5 435 aa16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 TprnA2AI08 749 aaKnown RBP16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Fam83gQ5SWY7 812 aa16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Polr2dQ9D7M8 142 aaKnown RBP16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Taf4E9QAP7 1042 aaKnown RBP16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Tubb5P99024 444 aaKnown RBP16.46■□□□□ 0.23
Chd4-201ENSMUST00000056889 Foxd4Q60688 444 aa16.46■□□□□ 0.22
Chd4-201ENSMUST00000056889 PdclQ9DBX2 301 aa16.46■□□□□ 0.22
Chd4-201ENSMUST00000056889 Ccdc157Q5SPX1 718 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Rab11fip4Q8BQP8 635 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 ZfaP23607 742 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 EnahQ03173 802 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Gm5935Q497S0 212 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Zbtb41Q811F1 908 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Nol11Q8BJW5 723 aaKnown RBP16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Clcn1Q64347 994 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Znf76Q8BMU0 568 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Zkscan16A2ALW2 728 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Anp32cQ64G17 123 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 9230110C19RikQ8CC70 267 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Usp33Q8R5K2 909 aa16.45■□□□□ 0.22
Chd4-201ENSMUST00000056889 Ncf2O70145 525 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Lin9Q8C735 542 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 MycbpQ9EQS3 103 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 LifrP42703 1092 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 PicalmQ7M6Y3 660 aaKnown RBP16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Fam133bQ9CVI2 245 aaKnown RBP16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Plekho1Q9JIY0 408 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Ice2Q3UZ18 988 aaKnown RBP16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 MaeaQ4VC33 396 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Gbp5Q8CFB4 590 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Lonrf3Q9D4H7 753 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Usp37Q8C0R0 979 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Ppp2r3dQ9Z176 491 aa16.44■□□□□ 0.22
Chd4-201ENSMUST00000056889 Arhgef6Q8K4I3 771 aa16.43■□□□□ 0.22
Chd4-201ENSMUST00000056889 Homer2Q9QWW1 354 aa16.43■□□□□ 0.22
Chd4-201ENSMUST00000056889 Cetn3O35648 167 aa16.43■□□□□ 0.22
Chd4-201ENSMUST00000056889 Slc51bQ80WK2 128 aa16.43■□□□□ 0.22
Chd4-201ENSMUST00000056889 Jmjd4Q8BFT6 427 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms