RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IGKV1-9A0A0C4DH69 117 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 BUB1B-PAK6H3BSN5 160 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 MFNGO00587 321 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 BCL2L11O43521 198 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 IGLV1-47P01700 117 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 GSTP1P09211 210 aaKnown RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 HRH1P35367 487 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 LUMP51884 338 aaPredicted RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 ATP1B3P54709 279 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 SNU13P55769 128 aaKnown RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 SLC35B1P78383 322 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 HLA-DRB5Q30154 266 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PXDC1Q5TGL8 231 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 ACOT7LQ6ZUV0 252 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 ZNF695Q8IW36 515 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PPP1R1CQ8WVI7 109 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 TMEM230Q96A57 120 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 BORCS8Q96FH0 119 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PRR25Q96S07 402 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 P2RX4Q99571 388 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 ASCL2Q99929 193 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 NICN1Q9BSH3 213 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 RNF126Q9BV68 326 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 ZFP57Q9NU63 452 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PFDN2Q9UHV9 154 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 IGKV1-27A0A075B6S5 117 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 A0A0B4J2A0 478 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 SERPINE3A8MV23 424 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 CCL24O00175 119 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 CCSO14618 274 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 SOCS1O15524 211 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 SPDEFO95238 335 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 HLA-AP01891 365 aaKnown RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 LYL1P12980 280 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 HIST1H1DP16402 221 aaKnown RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 ZNF93P35789 620 aaPredicted RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 FUT6P51993 359 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PRRX1P54821 245 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 IL15RAQ13261 267 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 HES1Q14469 280 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 UBE2V2Q15819 145 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PNLIPRP3Q17RR3 467 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 SCGB2B2Q4G0G5 96 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 NKAPLQ5M9Q1 402 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 CASC10Q5T4H9 136 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 TPTE2P1Q5T6R2 138 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 GLIPR1L1Q6UWM5 242 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 LHFPL1Q86WI0 220 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 FAM58AQ8N1B3 248 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 CHST4Q8NCG5 386 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PXT1Q8NFP0 134 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 MUC7Q8TAX7 377 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 TOMM40LQ969M1 308 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 RPEQ96AT9 228 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 PHYHIPLQ96FC7 376 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 SHPKQ9UHJ6 478 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 LINC00527Q9UJ94 153 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 GPR132Q9UNW8 380 aa6.18□□□□□ -1.42
CLK1-215ENST00000621181 LSM4Q9Y4Z0 139 aaKnown RBP6.18□□□□□ -1.42
CLK1-215ENST00000621181 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 H0YIZ8 118 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 SIRPB1O00241 398 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 SH2D1BO14796 132 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 FGF16O43320 207 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 CSN2P05814 226 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 SNRNP70P08621 437 aaKnown RBP6.17□□□□□ -1.42
CLK1-215ENST00000621181 PRKACAP17612 351 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 ECI1P42126 302 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 PTGFRP43088 359 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 OR3A1P47881 315 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 NPBWR2P48146 333 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 ZNF146Q15072 292 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 SPIN3Q5JUX0 258 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 FOXRED2Q8IWF2 684 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 COMMD1Q8N668 190 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 Q8NFD4 153 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 TERB2Q8NHR7 220 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 KCNG3Q8TAE7 436 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 STOML3Q8TAV4 291 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 SEC22AQ96IW7 307 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 CHST5Q9GZS9 411 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 C5orf66Q9H5L9 145 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 ZNF286AQ9HBT8 521 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 PCDHB16Q9NRJ7 776 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 CYTL1Q9NRR1 136 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 TAS2R3Q9NYW6 316 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 MRPS28Q9Y2Q9 187 aaKnown RBP6.17□□□□□ -1.42
CLK1-215ENST00000621181 SORL1Q92673 2214 aa6.17□□□□□ -1.42
CLK1-215ENST00000621181 TEX13DA0A0J9YY54 714 aaPredicted RBP6.16□□□□□ -1.42
CLK1-215ENST00000621181 A0A1W2PP11 408 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 TEX46H3BTG2 121 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 PMP2P02689 132 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 TMEM11P17152 192 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 BCL3P20749 454 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 PRKACBP22694 351 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 NFYBP25208 207 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 GLIPR1P48060 266 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 RBP2P50120 134 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 SUPT4H1P63272 117 aaKnown RBP6.16□□□□□ -1.42
CLK1-215ENST00000621181 AESQ08117 197 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms