RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 RBFOX3A6NFN3 312 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 SPINT2O43291 252 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 EIF3GO75821 320 aaKnown RBP eCLIP14.48□□□□□ -0.09
CNOT3-209ENST00000617930 P0C879 139 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 GZMHP20718 246 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 ZBTB34Q8NCN2 500 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 NINJ1Q92982 152 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 ABHD14AQ9BUJ0 271 aa14.48□□□□□ -0.09
CNOT3-209ENST00000617930 PUS1Q9Y606 427 aaKnown RBP eCLIP14.48□□□□□ -0.09
CNOT3-209ENST00000617930 BTBD17A6NE02 478 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 F2RL2O00254 374 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 ARG1P05089 322 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 CD55P08174 381 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 RAB5AP20339 215 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 AKR1C8PQ5T2L2 129 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 TEX36Q5VZQ5 186 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 ZNF788Q6ZQV5 615 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 RNASE11Q8TAA1 199 aaKnown RBP14.47□□□□□ -0.09
CNOT3-209ENST00000617930 LEAP2Q969E1 77 aa14.47□□□□□ -0.09
CNOT3-209ENST00000617930 ABCA4P78363 2273 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 hCG_1809904A0A1W2PP81 198 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 A0A1W2PR64 198 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 A0A1W2PRV1 198 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 SLC31A2O15432 143 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 ZNF816Q0VGE8 651 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-209ENST00000617930 STX12Q86Y82 276 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 ITLN2Q8WWU7 325 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-209ENST00000617930 ATP5SQ99766 215 aa14.46□□□□□ -0.09
CNOT3-209ENST00000617930 UNKLQ9H9P5 680 aaKnown RBP14.46□□□□□ -0.09
CNOT3-209ENST00000617930 RALYQ9UKM9 306 aaKnown RBP14.46□□□□□ -0.09
CNOT3-209ENST00000617930 H3BP45 60 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 S1PR2O95136 353 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 AGAP20933 346 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 TNFSF4P23510 183 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 G6PCP35575 357 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 CEBPGP53567 150 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 CCL20P78556 96 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 RUNX1Q01196 453 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 Q3ZCU0 254 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 C4orf17Q53FE4 359 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 TRAT1Q6PIZ9 186 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 FAM24BQ8N5W8 94 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 RBMXL1Q96E39 390 aaKnown RBP14.46□□□□□ -0.1
CNOT3-209ENST00000617930 CALYQ9NYX4 217 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 KIAA1456Q9P272 454 aa14.46□□□□□ -0.1
CNOT3-209ENST00000617930 LRBAP50851 2863 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 PIGBOS1A0A0B4J2F0 54 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 C5orf52A6NGY3 159 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 MMP23AO75900 390 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 DYSFO75923 2080 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 KRASP01116 189 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 ERVFRD-1P60508 538 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 RAB2AP61019 212 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 FLNCQ14315 2725 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 HAGHQ16775 308 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 NCR3LG1Q68D85 454 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 USF3Q68DE3 2245 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 SLC25A24Q6NUK1 477 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 SPSB3Q6PJ21 355 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 RAI1Q7Z5J4 1906 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-209ENST00000617930 PPP1R35Q8TAP8 253 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 DCHS2Q6V1P9 2916 aa14.45□□□□□ -0.1
CNOT3-209ENST00000617930 UBE2CO00762 179 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 YPEL1O60688 119 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 CLDN1O95832 211 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 RPL23AP62750 156 aaKnown RBP14.44□□□□□ -0.1
CNOT3-209ENST00000617930 TCTEX1D2Q8WW35 142 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 YPEL2Q96QA6 119 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 IFI27L2Q9H2X8 130 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 GNG12Q9UBI6 72 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 JPT1Q9UK76 154 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 ARFGEF3Q5TH69 2177 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 DFFBO76075 338 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 OR2C1O95371 312 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 S100A8P05109 93 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 S100A9P06702 114 aaKnown RBP14.44□□□□□ -0.1
CNOT3-209ENST00000617930 S100A12P80511 92 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 TLE4Q04727 773 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 MSMO1Q15800 293 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 RPL39P5Q59GN2 51 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 MMP24Q9Y5R2 645 aa14.44□□□□□ -0.1
CNOT3-209ENST00000617930 A0A1W2PPE3 182 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 RNF212BA8MTL3 300 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 C19orf84I3L1E1 186 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 TXNL1O43396 289 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 CLDN14O95500 239 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 IAPPP10997 89 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 NCOR1P1Q9H4R4 102 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 ZNF665Q9H7R5 613 aa14.43□□□□□ -0.1
CNOT3-209ENST00000617930 SYNGR2O43760 224 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 IFNA5P01569 189 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 HBE1P02100 147 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 RNF224P0DH78 156 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 DUTP33316 252 aaKnown RBP14.42□□□□□ -0.1
CNOT3-209ENST00000617930 ARL16Q0P5N6 197 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 TMEM267Q0VDI3 215 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-209ENST00000617930 CT45A1Q5HYN5 189 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 SSX8Q7RTT4 187 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 HAPLN4Q86UW8 402 aa14.42□□□□□ -0.1
CNOT3-209ENST00000617930 CT45A3Q8NHU0 189 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms