RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 LEUTXA8MZ59 168 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 LY6LH3BQJ8 138 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 M0R1X1 148 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 MPPED1O15442 326 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 SIX6O95475 246 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 IGHV1-69P01742 117 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 AKR1C4P17516 323 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 S100A11P31949 105 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 CEACAM3P40198 252 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 LGALS4P56470 323 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 PPP1R1AQ13522 171 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 EXOSC2Q13868 293 aaKnown RBP10.46□□□□□ -0.73
SPG7-209ENST00000564047 RPL39P5Q59GN2 51 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 GPR157Q5UAW9 335 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 C1orf229Q6ZS94 237 aaPredicted RBP10.46□□□□□ -0.73
SPG7-209ENST00000564047 KCTD9Q7L273 389 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 TBC1D26Q86UD7 250 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 PDZD9Q8IXQ8 264 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 TEX29Q8N6K0 151 aa10.46□□□□□ -0.73
SPG7-209ENST00000564047 HSD17B10Q99714 261 aaKnown RBP10.46□□□□□ -0.73
SPG7-209ENST00000564047 ARHGAP32A7KAX9 2087 aa10.46□□□□□ -0.74
SPG7-209ENST00000564047 TEX13DA0A0J9YY54 714 aaPredicted RBP10.45□□□□□ -0.74
SPG7-209ENST00000564047 A0A1W2PRD5 423 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 A0A1W2PRF3 423 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 A0A1W2PRM7 423 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 OOSP1A8MZH6 123 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 NPFFO15130 113 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 TXNL1O43396 289 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 TNFSF12O43508 249 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 B3GALNT1O75752 331 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 GAPDHP04406 335 aaKnown RBP10.45□□□□□ -0.74
SPG7-209ENST00000564047 EPHA1P21709 976 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 F2RP25116 425 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 DUTP33316 252 aaKnown RBP10.45□□□□□ -0.74
SPG7-209ENST00000564047 THBS3P49746 956 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 BPIFB3P59826 476 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 ZNF816Q0VGE8 651 aaPredicted RBP10.45□□□□□ -0.74
SPG7-209ENST00000564047 CATR1Q13166 79 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 KLF17Q5JT82 389 aaPredicted RBP10.45□□□□□ -0.74
SPG7-209ENST00000564047 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 TGIF2LXQ8IUE1 241 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 SGPP2Q8IWX5 399 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 RPEQ96AT9 228 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 ADTRPQ96IZ2 230 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 NAA60Q9H7X0 242 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 KCNIP3Q9Y2W7 256 aa10.45□□□□□ -0.74
SPG7-209ENST00000564047 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
SPG7-209ENST00000564047 FXYD6-FXYD2A0A087WZ82 144 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 TRAV14DV4A0A0A6YYC5 116 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 A0A0D9SG52 128 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 C3orf85A0A1B0GTC6 90 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 RPS10-NUDT3A0A1W2PQS6 291 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 DBX1A6NMT0 343 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 CRLF1O75462 422 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 SFT2D2O95562 160 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 FSHBP01225 129 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 CT45A6P0DMU7 189 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 CT45A5P0DMU8 189 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 CT45A7P0DMV0 189 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 IGHV4-38-2P0DP08 117 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 SAA4P35542 130 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 RAB14P61106 215 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 RPL30P62888 115 aaKnown RBP10.44□□□□□ -0.74
SPG7-209ENST00000564047 SUPT4H1P63272 117 aaKnown RBP10.44□□□□□ -0.74
SPG7-209ENST00000564047 CYCSP99999 105 aaKnown RBP10.44□□□□□ -0.74
SPG7-209ENST00000564047 ZNF345Q14585 488 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 LDLRAD2Q5SZI1 272 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 TMUB2Q71RG4 321 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 LHFPL4Q7Z7J7 247 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 TCTEX1D1Q8N7M0 179 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 NANPQ8TBE9 248 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 MALSU1Q96EH3 234 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 WDR89Q96FK6 387 aaPredicted RBP10.44□□□□□ -0.74
SPG7-209ENST00000564047 GALNT14Q96FL9 552 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 GPHA2Q96T91 129 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 NABP2Q9BQ15 211 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 LIN7CQ9NUP9 197 aaKnown RBP10.44□□□□□ -0.74
SPG7-209ENST00000564047 COMMD9Q9P000 198 aa10.44□□□□□ -0.74
SPG7-209ENST00000564047 LINC00473A8K010 186 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 H0Y980 276 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 ARPC5O15511 151 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 IFNA2P01563 188 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 VAMP1P23763 118 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 REG1BP48304 166 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 TAGLNQ01995 201 aaKnown RBP10.43□□□□□ -0.74
SPG7-209ENST00000564047 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 RUSC1-AS1Q66K80 236 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 CCDC144NLQ6NUI1 221 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 OR8H3Q8N146 312 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 ZNF383Q8NA42 475 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 OR51H1Q8NH63 302 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 TCTEX1D2Q8WW35 142 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 TMEM158Q8WZ71 300 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 DDB2Q92466 427 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 AJUBAQ96IF1 538 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 MRPL20Q9BYC9 149 aaKnown RBP10.43□□□□□ -0.74
SPG7-209ENST00000564047 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
SPG7-209ENST00000564047 NUP50Q9UKX7 468 aa10.43□□□□□ -0.74
SPG7-209ENST00000564047 PRELID3BQ9Y3B1 194 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms