RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 KLF7O75840 302 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-205ENST00000539661 WIPI1Q5MNZ9 446 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-205ENST00000539661 A0A096LPE4 126 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 A0A1W2PPZ6 126 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 SERF1AO75920 110 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 OR2H2O95918 312 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 UBE2G2P60604 165 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 TDRG1Q3Y452 100 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 OR4B1Q8NGF8 309 aa14.76□□□□□ -0.05
RAB40C-205ENST00000539661 MRPL18Q9H0U6 180 aaKnown RBP14.76□□□□□ -0.05
RAB40C-205ENST00000539661 DMXL1Q9Y485 3027 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF407Q9C0G0 2248 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 LY6G6EA0A0G2JKS1 128 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 RHBDL1O75783 438 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 RFPL3SP0C7P2 107 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 HLA-BQ31612 363 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 MYPOPQ86VE0 399 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-205ENST00000539661 QTRT1Q9BXR0 403 aaKnown RBP14.75□□□□□ -0.05
RAB40C-205ENST00000539661 PAM16Q9Y3D7 125 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 U3KQA8 63 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 NCKAP5O14513 1909 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 TRBV20OR9-2A0A075B6H5 130 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 TRBV9A0A0B4J1U6 114 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 SIRPB1O00241 398 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 TRAPPC6AO75865 159 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 RAC2P15153 192 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF90Q03938 601 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 KCNIP1Q9NZI2 227 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 ZFP30Q9Y2G7 519 aa14.75□□□□□ -0.05
RAB40C-205ENST00000539661 TMEM265A0A087WTH1 108 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 WISP2O76076 250 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 S1PR2O95136 353 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 CD1BP29016 333 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF816Q0VGE8 651 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-205ENST00000539661 OR2Y1Q8NGV0 311 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 ZDHHC16Q969W1 377 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 TMEM204Q9BSN7 226 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 PGPEP1LA6NFU8 196 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 MMP23AO75900 390 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 DEFA4P12838 97 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 GFRA1P56159 465 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 PLP2Q04941 152 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 H2BFWTQ7Z2G1 175 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 WDR31Q8NA23 367 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 VN1R17PQ8TDU5 208 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 TAAR6Q96RI8 345 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 LY96Q9Y6Y9 160 aa14.74□□□□□ -0.05
RAB40C-205ENST00000539661 TRAV38-1A0A0B4J264 116 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 SELEP16581 610 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 CD33P20138 364 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 CBLN1P23435 193 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 CDKN1AP38936 164 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 OPRK1P41145 380 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 COMPP49747 757 aaPredicted RBP14.73□□□□□ -0.05
RAB40C-205ENST00000539661 ERVK11-1P61568 191 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 RPL30P62888 115 aaKnown RBP14.73□□□□□ -0.05
RAB40C-205ENST00000539661 OR2D2Q9H210 308 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 POLDIP2Q9Y2S7 368 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 ARHGAP21Q5T5U3 1957 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 CXorf1O96002 111 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 STAG3L2P0CL84 134 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 STAG3L3P0CL85 134 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF146Q15072 292 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 BAGE3Q86Y29 109 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 BAGE2Q86Y30 109 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 ARL6IP6Q8N6S5 226 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 OCC1Q8TAD7 63 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 UBALD1Q8TB05 177 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 SAMD10Q9BYL1 202 aa14.73□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF503-AS2A6NEH8 195 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 C15orf62A8K5M9 175 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 ZNHIT1O43257 154 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 OR5I1Q13606 314 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 C9orf135Q5VTT2 229 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 GALMQ96C23 342 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 RNF2Q99496 336 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 RTL8AQ9BWD3 113 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 OPN3Q9H1Y3 402 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-205ENST00000539661 PRO3102Q9H379 93 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 YLPM1P49750 1951 aaKnown RBP14.72□□□□□ -0.05
RAB40C-205ENST00000539661 TTC28Q96AY4 2481 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 SH2D1BO14796 132 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 LGALS4P56470 323 aa14.72□□□□□ -0.05
RAB40C-205ENST00000539661 CDX2Q99626 313 aaPredicted RBP14.72□□□□□ -0.05
RAB40C-205ENST00000539661 A8MXE2 369 aa14.71□□□□□ -0.05
RAB40C-205ENST00000539661 CA6P23280 308 aa14.71□□□□□ -0.05
RAB40C-205ENST00000539661 GDF1P27539 372 aa14.71□□□□□ -0.05
RAB40C-205ENST00000539661 C5orf30Q96GV9 206 aa14.71□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF703Q9H7S9 590 aaPredicted RBP14.71□□□□□ -0.05
RAB40C-205ENST00000539661 ZNF586Q9NXT0 402 aa14.71□□□□□ -0.05
RAB40C-205ENST00000539661 C17orf98A8MV24 154 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 C9JCJ5 164 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 C3orf80F5H4A9 247 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 K7ESF4 209 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 NEURL1O76050 574 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 ARL14EPLP0DKL9 152 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 BRWD1-AS2P59051 145 aa14.71□□□□□ -0.06
RAB40C-205ENST00000539661 RPP30P78346 268 aaKnown RBP14.71□□□□□ -0.06
RAB40C-205ENST00000539661 RPL19P84098 196 aaKnown RBP14.71□□□□□ -0.06
RAB40C-205ENST00000539661 GCSAMLQ5JQS6 135 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms