RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TAF15Q92804 592 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 C2orf88Q9BSF0 95 aa10.55□□□□□ -0.72
PCDHGA6-201ENST00000517434 A0A1B0GWB2 263 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 HOXA4Q00056 320 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 ABHD17AQ96GS6 310 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 CNOT1A5YKK6 2376 aaKnown RBP10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 A0A0U1RQV5 110 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 CDCP2Q5VXM1 449 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 ST6GALNAC3Q8NDV1 305 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 PLPPR2Q96GM1 343 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 SMIM8Q96KF7 97 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 CCL19Q99731 98 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 PRDM13Q9H4Q3 707 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 COA4Q9NYJ1 87 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 ADRA2AP08913 450 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 CD1BP29016 333 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 MGAT2Q10469 447 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 GCSAMQ8N6F7 178 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 BEND2Q8NDZ0 799 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR1K1Q8NGR3 316 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF385AQ96PM9 386 aaKnown RBP10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 CHST5Q9GZS9 411 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 PRNDQ9UKY0 176 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 SIP14410 1827 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 GVINP1Q7Z2Y8 2422 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF205O95201 554 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 PMELP40967 661 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 KIAA1644Q3SXP7 199 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 TIMM23BQ5SRD1 257 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 NEU4Q8WWR8 484 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
PCDHGA6-201ENST00000517434 FAM186AA6NE01 2351 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 FAM106CPP0CH98 169 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MC5RP33032 325 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MAS1LP35410 378 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZAR1Q86SH2 424 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MMD2Q8IY49 270 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 CRIPAKQ8N1N5 446 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MUC15Q8N387 334 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MS4A18H0YCH9 400 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 NTN1O95631 604 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 IL4P05112 153 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 CELA2AP08217 269 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MS4A18Q3C1V0 323 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 CYP2G1PQ6ZSU1 146 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 DYNLRB2Q8TF09 96 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 LSM10Q969L4 123 aaKnown RBP10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 VWCEQ96DN2 955 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMEM222Q9H0R3 208 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF236Q9UL36 1845 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 DEFB108AA8MXU0 73 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 KIR3DL2P43630 455 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 TNXAQ16473 311 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 CALHM1Q8IU99 346 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 OR1B1Q8NGR6 318 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZPLD1Q8TCW7 415 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 WDYHV1Q96HA8 205 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 ABHD14AQ9BUJ0 271 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 RBKSQ9H477 322 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 UPK3AO75631 287 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 SRP19P09132 144 aaKnown RBP10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 C1orf100Q5SVJ3 147 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 C10orf113Q5VZT2 155 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF502Q8TBZ5 544 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 Q8WTZ3 238 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 NPVFQ9HCQ7 196 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 JKAMPQ9P055 326 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 HSPB7Q9UBY9 170 aa10.53□□□□□ -0.72
PCDHGA6-201ENST00000517434 GNG7O60262 68 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 PSG2P11465 335 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 GPX4P36969 197 aaPredicted RBP10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 UNQ9370/PRO34162Q6UXP9 181 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 NRTNQ99748 197 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 TMUB1Q9BVT8 246 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 LINC00470Q9BZP3 86 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 SH3BGRL3Q9H299 93 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 DTX4Q9Y2E6 619 aa10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 TBL2Q9Y4P3 447 aaKnown RBP10.52□□□□□ -0.72
PCDHGA6-201ENST00000517434 ZNF708P17019 499 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 LYZP61626 148 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 CCL8P80075 99 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 JMJD8Q96S16 334 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 WNT10AQ9GZT5 417 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 RAXQ9Y2V3 346 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 MRPS18CQ9Y3D5 142 aaKnown RBP10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 EP300Q09472 2414 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 NPIPB13A6NJU9 1138 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 NPIPB4C9JG80 1138 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 CBLN1P23435 193 aa10.52□□□□□ -0.73
PCDHGA6-201ENST00000517434 LIMS1P48059 325 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms