RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ZNF880Q6PDB4 577 aa9.33□□□□□ -0.92
DDX41-215ENST00000512431 SLC25A42Q86VD7 318 aa9.33□□□□□ -0.92
DDX41-215ENST00000512431 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.33□□□□□ -0.92
DDX41-215ENST00000512431 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
DDX41-215ENST00000512431 SRSF12Q8WXF0 261 aaKnown RBP9.33□□□□□ -0.92
DDX41-215ENST00000512431 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
DDX41-215ENST00000512431 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
DDX41-215ENST00000512431 BABAM2Q9NXR7 383 aa9.33□□□□□ -0.92
DDX41-215ENST00000512431 A0A1W2PPK0 400 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 OR2J3O76001 311 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 NAPSAO96009 420 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 UBBP0CG47 229 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 RRASP10301 218 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 ARL3P36405 182 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 HLA-DRB3P79483 266 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 PRSS8Q16651 343 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 BTNL8Q6UX41 500 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 NKAIN3Q8N8D7 197 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 TEX45Q8NA69 505 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 UQCC2Q9BRT2 126 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 MRPS18AQ9NVS2 196 aaKnown RBP9.32□□□□□ -0.92
DDX41-215ENST00000512431 PLEKHJ1Q9NW61 149 aa9.32□□□□□ -0.92
DDX41-215ENST00000512431 XRCC3O43542 346 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 CREBL2O60519 120 aaPredicted RBP9.31□□□□□ -0.92
DDX41-215ENST00000512431 ALPLP05186 524 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 GSTT2P0CG29 244 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 GSTT2BP0CG30 244 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 GABRB1P18505 474 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
DDX41-215ENST00000512431 TPBGQ13641 420 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 TMEM177Q53S58 311 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 OR2G6Q5TZ20 316 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 TTC9CQ8N5M4 171 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 MARC2Q969Z3 335 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 UBQLN2Q9UHD9 624 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 FBXL7Q9UJT9 491 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 DMRT1Q9Y5R6 373 aa9.31□□□□□ -0.92
DDX41-215ENST00000512431 TRBV5-7A0A0A0MS05 114 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 TRBV6-6A0A0A6YYG2 114 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 TMEM213A2RRL7 107 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 DPPA5A6NC42 116 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 SRRM4A7MD48 611 aaKnown RBP9.3□□□□□ -0.92
DDX41-215ENST00000512431 A8MWP6 167 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 SCTP09683 121 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 CTRB1P17538 263 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 ETV1P50549 477 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 UBE2KP61086 200 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 RPS27AP62979 156 aaKnown RBP9.3□□□□□ -0.92
DDX41-215ENST00000512431 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 CLEC19AQ6UXS0 136 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 RHOXF1Q8NHV9 184 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 GALNT14Q96FL9 552 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 SLC29A1Q99808 456 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 SPAG8Q99932 426 aaPredicted RBP9.3□□□□□ -0.92
DDX41-215ENST00000512431 TMEM59Q9BXS4 323 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 C6orf62Q9GZU0 229 aaPredicted RBP9.3□□□□□ -0.92
DDX41-215ENST00000512431 FGF20Q9NP95 211 aaPredicted RBP9.3□□□□□ -0.92
DDX41-215ENST00000512431 RDH8Q9NYR8 311 aa9.3□□□□□ -0.92
DDX41-215ENST00000512431 IGLL5B9A064 214 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 EI24O14681 340 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
DDX41-215ENST00000512431 MYL12AP19105 171 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 DCKP27707 260 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 HTR2CP28335 458 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 RPS11P62280 158 aaKnown RBP eCLIP9.29□□□□□ -0.92
DDX41-215ENST00000512431 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 ZNF585BQ52M93 769 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 IDO2Q6ZQW0 420 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 GVQW1Q8N7I0 195 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 EEF1AKMT3Q96AZ1 226 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 SLC7A6OSQ96CW6 309 aaPredicted RBP9.29□□□□□ -0.92
DDX41-215ENST00000512431 RARRES2Q99969 163 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 OR2D2Q9H210 308 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 MRPL27Q9P0M9 148 aaKnown RBP9.29□□□□□ -0.92
DDX41-215ENST00000512431 ZNF257Q9Y2Q1 563 aa9.29□□□□□ -0.92
DDX41-215ENST00000512431 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 PRSS29PA6NIE9 313 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 DHFRP00374 187 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 SERPINB10P48595 397 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 MED21Q13503 144 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 C1orf146Q5VVC0 180 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 LAMTOR1Q6IAA8 161 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 Q9N2K0 584 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 SDHAF2Q9NX18 166 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 AK3Q9UIJ7 227 aa9.28□□□□□ -0.92
DDX41-215ENST00000512431 RBM7Q9Y580 266 aaKnown RBP9.28□□□□□ -0.92
DDX41-215ENST00000512431 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.92
DDX41-215ENST00000512431 IRGMA1A4Y4 181 aa9.27□□□□□ -0.93
DDX41-215ENST00000512431 CRYZL1O95825 349 aa9.27□□□□□ -0.93
DDX41-215ENST00000512431 MYOD1P15172 320 aa9.27□□□□□ -0.93
DDX41-215ENST00000512431 SRMP19623 302 aa9.27□□□□□ -0.93
DDX41-215ENST00000512431 FCGR2BP31994 310 aaPredicted RBP9.27□□□□□ -0.93
DDX41-215ENST00000512431 TTC23Q5W5X9 447 aa9.27□□□□□ -0.93
DDX41-215ENST00000512431 ZFP41Q8N8Y5 198 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms