RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TTC33Q6PID6 262 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 TMEM144Q7Z5S9 345 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 AMN1Q8IY45 258 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 DEDD2Q8WXF8 326 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 RBPMSQ93062 196 aaKnown RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 SMIM12Q96EX1 92 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 PKMYT1Q99640 499 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZNF2Q9BSG1 426 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 SCRT1Q9BWW7 348 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 UBAP1Q9NZ09 502 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 CCL26Q9Y258 94 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 ZFYVE26Q68DK2 2539 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 FAM208BQ5VWN6 2430 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 CACNA1GO43497 2377 aa3.03□□□□□ -1.92
HMGB1P3-201ENST00000502802 ACACAQ13085 2346 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 PTPRJQ12913 1337 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 KALRNO60229 2985 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 PCDH15Q96QU1 1955 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 IGHV1-45A0A0A0MS14 117 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 IGHV3-43A0A0B4J1X8 118 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 VPS37CA5D8V6 355 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 GOLGA6L4A6NEF3 574 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 K7ERS5 55 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 HPGDSO60760 199 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 NIPSNAP2O75323 286 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 PRB2P02812 416 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 HIST1H1CP16403 213 aaKnown RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 HOXA6P31267 233 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 GTF2A1P52655 376 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 RBX1P62877 108 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 MRPS15P82914 257 aaKnown RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 TFAMQ00059 246 aaKnown RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 ENDOGQ14249 297 aaKnown RBP3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 CLEC12BQ2HXU8 276 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 DNLZQ5SXM8 178 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 ELP2Q6IA86 826 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 DRAM2Q6UX65 266 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 FAM19A3Q7Z5A8 133 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 SGPP2Q8IWX5 399 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 OR5B17Q8NGF7 314 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 OR52E4Q8NGH9 312 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 STOML3Q8TAV4 291 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 SPPL2BQ8TCT7 592 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 METTL9Q9H1A3 318 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 VSIRQ9H7M9 311 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 MGAQ8IWI9 3026 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 IGSF10Q6WRI0 2623 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 BAHCC1Q9P281 2608 aa3.02□□□□□ -1.93
HMGB1P3-201ENST00000502802 PKD1L2Q7Z442 2459 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 PLXNA2O75051 1894 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 DAPL1A0PJW8 107 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 POP7O75817 140 aaKnown RBP3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 SOX14O95416 240 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 ASS1P00966 412 aaKnown RBP3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 GRPRP30550 384 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 MP68P56378 58 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 CLDN12P56749 244 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 RAB2AP61019 212 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 DR1Q01658 176 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 SKP2Q13309 424 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 FAM53BQ14153 422 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 TBC1D28Q2M2D7 210 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 DNAL1Q4LDG9 190 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 TMEM69Q5SWH9 247 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 XKRXQ6PP77 449 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 ZFP82Q8N141 532 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 TMEM86AQ8N2M4 240 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 RNF182Q8N6D2 247 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 LINC00301Q8NCQ3 95 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 SEC22CQ9BRL7 303 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 SHANK2-AS3Q9BTD1 123 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 PLA2G12AQ9BZM1 189 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 CHST5Q9GZS9 411 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 PLEKHJ1Q9NW61 149 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 PRO0461Q9UI25 63 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 ATPIF1Q9UII2 106 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 PRELID1Q9Y255 219 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 DOCK4Q8N1I0 1966 aa3.01□□□□□ -1.93
HMGB1P3-201ENST00000502802 FASNP49327 2511 aaKnown RBP3□□□□□ -1.93
HMGB1P3-201ENST00000502802 GCN1Q92616 2671 aaKnown RBP3□□□□□ -1.93
HMGB1P3-201ENST00000502802 ASXL3Q9C0F0 2248 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 IGHV3-21A0A0B4J1V1 117 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 LEUTXA8MZ59 168 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 F5H5P2 479 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 K7EQS6 105 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 CCRL2O00421 344 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 CRTAPO75718 401 aaPredicted RBP3□□□□□ -1.93
HMGB1P3-201ENST00000502802 FSTL3O95633 263 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 TNNC2P02585 160 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 MSNP26038 577 aaKnown RBP3□□□□□ -1.93
HMGB1P3-201ENST00000502802 CASP1P29466 404 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 FMODQ06828 376 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 PDGFRLQ15198 375 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 LY6EQ16553 131 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 TMEM251Q8N6I4 163 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 DNAAF3Q8N9W5 541 aa3□□□□□ -1.93
HMGB1P3-201ENST00000502802 OR11L1Q8NGX0 322 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 928.6 ms