RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 TBX15Q96SF7 602 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 NABP2Q9BQ15 211 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 C7orf69Q9H7B7 122 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 ZC4H2Q9NQZ6 224 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 HIF1ANQ9NWT6 349 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 DPM3Q9P2X0 92 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 CACNG5Q9UF02 275 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 WASHC3Q9Y3C0 194 aa6.54□□□□□ -1.36
FDPS-218ENST00000492887 FLNCQ14315 2725 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 CHD6Q8TD26 2715 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 SPG11Q96JI7 2443 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 MPTX1A8MV57 137 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 RNASEK-C17orf49H0YIS7 233 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 SNAPC5O75971 98 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 CDS2O95674 445 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 HRASP01112 189 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 C1QBP02746 253 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 RLN2P04090 185 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 CT45A6P0DMU7 189 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 CT45A5P0DMU8 189 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 CT45A7P0DMV0 189 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 NQO2P16083 231 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 H2BFSP57053 126 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 RPS16P62249 146 aaKnown RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 EIF4EBP1Q13541 118 aaPredicted RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 PLGLAQ15195 96 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 TPTE2P1Q5T6R2 138 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 RUSC1-AS1Q66K80 236 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 DHRS7BQ6IAN0 325 aaPredicted RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 CCDC144NLQ6NUI1 221 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 C1orf122Q6ZSJ8 110 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 LHFPL4Q7Z7J7 247 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 NOXA1Q86UR1 476 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 FAM219AQ8IW50 185 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 ZNF383Q8NA42 475 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 OR4P4Q8NGL7 312 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 OR4A16Q8NH70 328 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 GRPEL2Q8TAA5 225 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 PPP1R1CQ8WVI7 109 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 GPR146Q96CH1 333 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 TMEM56Q96MV1 263 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 CLCC1Q96S66 551 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 NMES1Q9C002 83 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 NUP50Q9UKX7 468 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 RCL1Q9Y2P8 373 aaKnown RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 TBL2Q9Y4P3 447 aaKnown RBP6.53□□□□□ -1.36
FDPS-218ENST00000492887 TMEM56-RWDD3S4R434 201 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 COL12A1Q99715 3063 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
FDPS-218ENST00000492887 LRRK2Q5S007 2527 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 PLXNB1O43157 2135 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 IGHV1-3A0A0C4DH29 117 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 MARCH11A6NNE9 402 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 ODF3BA8MYP8 253 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 H0YJW9 148 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 NPFFO15130 113 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 IGLV1-47P01700 117 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 MMP9P14780 707 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 PVALBP20472 110 aaPredicted RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 GATA3P23771 443 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 MC5RP33032 325 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 NKX2-1P43699 371 aaPredicted RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 UBE2E1P51965 193 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 OR2B8PP59922 312 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 PAX2Q02962 417 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 RAB32Q13637 225 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 SSX2Q16385 188 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 IZUMO4Q1ZYL8 232 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 TMEM249Q2WGJ8 235 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 VMA21Q3ZAQ7 101 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 ZNF585BQ52M93 769 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 MINOS1Q5TGZ0 78 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 CYB5R2Q6BCY4 276 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 HCP5Q6MZN7 132 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 C1orf229Q6ZS94 237 aaPredicted RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 OR8H3Q8N146 312 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 WFDC11Q8NEX6 87 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 LSM10Q969L4 123 aaKnown RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 WDR89Q96FK6 387 aaPredicted RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 FOXC2Q99958 501 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 AIFM2Q9BRQ8 373 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 FAM212BQ9NTI7 297 aaPredicted RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 ZFP57Q9NU63 452 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 MBD2Q9UBB5 411 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 PAIP2BQ9ULR5 123 aaKnown RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 POLR3KQ9Y2Y1 108 aaPredicted RBP6.52□□□□□ -1.37
FDPS-218ENST00000492887 MMP24Q9Y5R2 645 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 MINOS1-NBL1R4GNA1 71 aa6.52□□□□□ -1.37
FDPS-218ENST00000492887 A0A0G2JRQ6 117 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 CEBPZOSA8MTT3 80 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 TIMM23O14925 209 aa6.51□□□□□ -1.37
FDPS-218ENST00000492887 ARPC5O15511 151 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms