RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 TLN2Q9Y4G6 2542 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 LOC102725191A0A1B0GVB3 256 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 MRPS12O15235 138 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 TFPI2P48307 235 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 GRB2P62993 217 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 DHRS2Q13268 280 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 PDGFRLQ15198 375 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 SPANXN3Q5MJ09 141 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 Q6ZTK2 550 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 RBMXL3Q8N7X1 1067 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 LRTM2Q8N967 370 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 OR4F17Q8NGA8 305 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 OR51T1Q8NGJ9 327 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNRF4Q8WWF5 429 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 MS4A4EQ96PG1 132 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 OR4F4Q96R69 305 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 HSD17B10Q99714 261 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF670Q9BS34 389 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 TEX101Q9BY14 249 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 PLA2G2FQ9BZM2 168 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM222Q9H0R3 208 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 MEPEQ9NQ76 525 aaPredicted RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 BET1LQ9NYM9 111 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 CELSR2Q9HCU4 2923 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 FAM90A26D6RGX4 464 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 G3V3Q6 166 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 CCL21O00585 134 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 NDUFC2O95298 119 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 MRPL3P09001 348 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 T-ENOLP0DO92 83 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 HIST1H1DP16402 221 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF84P51523 738 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 SUMO2P61956 95 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 RPS13P62277 151 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM267Q0VDI3 215 aaPredicted RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 IHHQ14623 411 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF440Q8IYI8 595 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF615Q8N8J6 731 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 EEF1AKMT3Q96AZ1 226 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 GPR21Q99679 349 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 MRPL45Q9BRJ2 306 aaKnown RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 RTBDNQ9BSG5 229 aaPredicted RBP5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 SEC11CQ9BY50 192 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 CHST6Q9GZX3 395 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM30AQ9NV96 361 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 KLK11Q9UBX7 282 aa5.02□□□□□ -1.61
SMARCE1-208ENST00000474246 DOCK8Q8NF50 2099 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 PCLOQ9Y6V0 5065 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM178BH3BS89 294 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 H7BYZ3 331 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 K7EQS6 105 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 MYL12BO14950 172 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 LGALS1P09382 135 aaKnown RBP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 ERGP11308 486 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 TAF10Q12962 218 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 PHLDA2Q53GA4 152 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 PRR30Q53SZ7 412 aaPredicted RBP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 DCAF12Q5T6F0 453 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM244Q5VVB8 128 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 SP5Q6BEB4 398 aaPredicted RBP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF773Q6PK81 442 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 ALKAL2Q6UX46 152 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 APOOLQ6UXV4 268 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 GAPTQ8N292 157 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 PPTC7Q8NI37 304 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 MZB1Q8WU39 189 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 DLX4Q92988 240 aaPredicted RBP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF419Q96HQ0 510 aaPredicted RBP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 CIB3Q96Q77 187 aaPredicted RBP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 PRR25Q96S07 402 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 C1QTNF6Q9BXI9 259 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 SLC25A31Q9H0C2 315 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 RBKSQ9H477 322 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 RBM22Q9NW64 420 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 TAS2R8Q9NYW2 309 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 UBIAD1Q9Y5Z9 338 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 KIAA1671Q9BY89 1806 aa5.01□□□□□ -1.61
SMARCE1-208ENST00000474246 RBFOX3A6NFN3 312 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 PGAM2P15259 253 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 COX5AP20674 150 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 GNLYP22749 145 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 SHC1P29353 583 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 UBE2NP61088 152 aaKnown RBP5□□□□□ -1.61
SMARCE1-208ENST00000474246 C1orf189Q5VU69 101 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 FRG2Q64ET8 278 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 STAC2Q6ZMT1 411 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 KLHDC1Q8N7A1 406 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 ACKR4Q9NPB9 350 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 DLL4Q9NR61 685 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 KCNIP1Q9NZI2 227 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 MTCL1Q9Y4B5 1905 aaKnown RBP5□□□□□ -1.61
SMARCE1-208ENST00000474246 UBE2QL1A1L167 161 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM212A6NML5 194 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 H0YJW9 148 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 SMKR1H3BMG3 65 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 TRIAP1O43715 76 aa5□□□□□ -1.61
SMARCE1-208ENST00000474246 FAM20BO75063 409 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms