RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CLDND2Q8NHS1 167 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 C10orf105Q8TEF2 133 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 FAM168AQ92567 244 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 ST6GALNAC6Q969X2 333 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 ARPC5LQ9BPX5 153 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 ZNRD1Q9P1U0 126 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 ONECUT1Q9UBC0 465 aa7.65□□□□□ -1.18
VPS52-216ENST00000471309 AMMECR1Q9Y4X0 333 aaPredicted RBP7.65□□□□□ -1.18
VPS52-216ENST00000471309 ABCA4P78363 2273 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 VWC2LB2RUY7 222 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 WRBO00258 174 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 TXNL1O43396 289 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 KCNAB3O43448 404 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 SSSCA1O60232 199 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 GPR137BO60478 399 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 APOA2P02652 100 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 NQO2P16083 231 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
VPS52-216ENST00000471309 PRRX1P54821 245 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 ATP5J2P56134 94 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 ERVK-16P61578 105 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 LMO4P61968 165 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 POLR2GP62487 172 aaKnown RBP eCLIP7.64□□□□□ -1.19
VPS52-216ENST00000471309 UBA52P62987 128 aaKnown RBP7.64□□□□□ -1.19
VPS52-216ENST00000471309 IZUMO4Q1ZYL8 232 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 AARDQ4LEZ3 155 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 GPR157Q5UAW9 335 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 CLEC2AQ6UVW9 174 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 Q8N7P7 452 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 ZNF680Q8NEM1 530 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 OR8H1Q8NGG4 311 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 OR5AN1Q8NGI8 311 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 OR13D1Q8NGV5 346 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 RAB40CQ96S21 281 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 PCGF1Q9BSM1 259 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 MRPL20Q9BYC9 149 aaKnown RBP7.64□□□□□ -1.19
VPS52-216ENST00000471309 GSX2Q9BZM3 304 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 UNKLQ9H9P5 680 aaKnown RBP7.64□□□□□ -1.19
VPS52-216ENST00000471309 SLC35D1Q9NTN3 355 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 LYRM2Q9NU23 88 aaPredicted RBP7.64□□□□□ -1.19
VPS52-216ENST00000471309 HSPB7Q9UBY9 170 aa7.64□□□□□ -1.19
VPS52-216ENST00000471309 IGHV2-70DA0A0C4DH43 119 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 H0YJW9 148 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 TAAR5O14804 337 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 SYNGR2O43760 224 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 CRYZL1O95825 349 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 HRASP01112 189 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 IFNA7P01567 189 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 PRTN3P24158 256 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 DSCR9P59020 149 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 VAMP2P63027 116 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 PAX2Q02962 417 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 EXOSC2Q13868 293 aaKnown RBP7.63□□□□□ -1.19
VPS52-216ENST00000471309 PDPNQ86YL7 162 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 TGIF2LXQ8IUE1 241 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 OR2C3Q8N628 320 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 OR11H6Q8NGC7 330 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 OSR1Q8TAX0 266 aaPredicted RBP7.63□□□□□ -1.19
VPS52-216ENST00000471309 ST8SIA2Q92186 375 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 MARVELD3Q96A59 401 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 NABP2Q9BQ15 211 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 AIFM2Q9BRQ8 373 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 MAGT1Q9H0U3 335 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 ZC4H2Q9NQZ6 224 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.63□□□□□ -1.19
VPS52-216ENST00000471309 TMEM140Q9NV12 185 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 CACFD1Q9UGQ2 172 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 POLR3KQ9Y2Y1 108 aaPredicted RBP7.63□□□□□ -1.19
VPS52-216ENST00000471309 KPTNQ9Y664 436 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 WSB1Q9Y6I7 421 aa7.63□□□□□ -1.19
VPS52-216ENST00000471309 USP9XQ93008 2570 aaPredicted RBP7.63□□□□□ -1.19
VPS52-216ENST00000471309 ODF3BA8MYP8 253 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 BUB1B-PAK6H3BSN5 160 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 MED6O75586 246 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 FOXH1O75593 365 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 NXPH3O95157 252 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 TMEM50AO95807 157 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 OR9G9P0C7N8 305 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 COX7A1P24310 79 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 ZFP36P26651 326 aaKnown RBP7.62□□□□□ -1.19
VPS52-216ENST00000471309 MC5RP33032 325 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 RAB13P51153 203 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 TAS2R30P59541 319 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 ARF6P62330 175 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 RPL23AP62750 156 aaKnown RBP7.62□□□□□ -1.19
VPS52-216ENST00000471309 TNFRSF9Q07011 255 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 BAXQ07812 192 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 PDLIM3Q53GG5 364 aaPredicted RBP7.62□□□□□ -1.19
VPS52-216ENST00000471309 TMEM177Q53S58 311 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 OR4A47Q6IF82 309 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 ZNF429Q86V71 674 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 OR4P4Q8NGL7 312 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 PHYHIPLQ96FC7 376 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 ZNF471Q9BX82 626 aaPredicted RBP7.62□□□□□ -1.19
VPS52-216ENST00000471309 SLC25A31Q9H0C2 315 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 FBXL17Q9UF56 701 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 UBQLN2Q9UHD9 624 aa7.62□□□□□ -1.19
VPS52-216ENST00000471309 WASHC3Q9Y3C0 194 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms