RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 HSD17B10Q99714 261 aaKnown RBP14.07□□□□□ -0.16
PTPRC-206ENST00000413409 GINS3Q9BRX5 216 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 CALYQ9NYX4 217 aa14.07□□□□□ -0.16
PTPRC-206ENST00000413409 PLCE1Q9P212 2302 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 IGSF23A1L1A6 192 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 SHISA9B4DS77 424 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 LGALS8O00214 317 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 SIGLEC5O15389 551 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 CYB5R3P00387 301 aaPredicted RBP14.06□□□□□ -0.16
PTPRC-206ENST00000413409 CGB3P0DN86 165 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 CGB7P0DN87 165 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 EFNB3Q15768 340 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 C11orf71Q6IPW1 123 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 C1orf87Q8N0U7 546 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 C3orf56Q8N813 242 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 SMIM8Q96KF7 97 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 DCTN5Q9BTE1 182 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 SMIM3Q9BZL3 60 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 CACNG5Q9UF02 275 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 MMP24Q9Y5R2 645 aa14.06□□□□□ -0.16
PTPRC-206ENST00000413409 CMYA5Q8N3K9 4069 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 SEC11BP0C7V7 166 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 P0C879 139 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 EPHA1P21709 976 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 ZNF266Q14584 549 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 TMEM252Q8N6L7 170 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 ZNRF1Q8ND25 227 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 BSCL2Q96G97 398 aaPredicted RBP14.05□□□□□ -0.16
PTPRC-206ENST00000413409 LINC00574Q9H8X3 128 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 WFDC1Q9HC57 220 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 GNG12Q9UBI6 72 aa14.05□□□□□ -0.16
PTPRC-206ENST00000413409 TRGV10A0A0A0MS01 117 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 TRAV38-1A0A0B4J264 116 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 FAM24AA6NFZ4 105 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 LPAR6P43657 344 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 CAV2P51636 162 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 EDDM3BP56851 147 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 LOXL3P58215 753 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 RPL30P62888 115 aaKnown RBP14.04□□□□□ -0.16
PTPRC-206ENST00000413409 BLOC1S1P78537 153 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 MORN2Q502X0 79 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 FAM201AQ5SY85 155 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 HIST2H2BDQ6DRA6 164 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 IL34Q6ZMJ4 242 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 STPG2Q8N412 459 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 OR1S2Q8NGQ3 325 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 CD300LFQ8TDQ1 290 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 TCTEX1D2Q8WW35 142 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 CORO2AQ92828 525 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 MARC2Q969Z3 335 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 AGMATQ9BSE5 352 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 MAGT1Q9H0U3 335 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 SAP30LQ9HAJ7 183 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 MMP26Q9NRE1 261 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 RNF150Q9ULK6 438 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 PSG11Q9UQ72 335 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 GAB2Q9UQC2 676 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 WSB1Q9Y6I7 421 aa14.04□□□□□ -0.16
PTPRC-206ENST00000413409 IGHV3-43A0A0B4J1X8 118 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 ZNF729A6NN14 1252 aaPredicted RBP14.03□□□□□ -0.16
PTPRC-206ENST00000413409 ZNF705EA8MWA4 302 aaPredicted RBP14.03□□□□□ -0.16
PTPRC-206ENST00000413409 TEX46H3BTG2 121 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 TOR1AO14656 332 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 ST8SIA5O15466 376 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 CHST1O43916 411 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 IGHV3-43DP0DP04 118 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 GPR12P47775 334 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 RAB7AP51149 207 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 TAS2R30P59541 319 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 RPL23AP62750 156 aaKnown RBP14.03□□□□□ -0.16
PTPRC-206ENST00000413409 SWI5Q1ZZU3 235 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 C17orf58Q2M2W7 97 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 Q3ZCU0 254 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 PRR31Q5SQ13 230 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.03□□□□□ -0.16
PTPRC-206ENST00000413409 RFESDQ8TAC1 157 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 PARP11Q9NR21 331 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 GFOD1Q9NXC2 390 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 TAS2R3Q9NYW6 316 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 NUP50Q9UKX7 468 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 TANC2Q9HCD6 1990 aa14.03□□□□□ -0.16
PTPRC-206ENST00000413409 KBTBD11-OT1A0A1B0GTJ5 212 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 VWC2LB2RUY7 222 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 E7EQL1 145 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 RBFOX2O43251 390 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTPRC-206ENST00000413409 LY6HO94772 140 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 TMEM50AO95807 157 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 TGFAP01135 160 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 SPP1P10451 314 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 SELLP14151 372 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 RAB5CP51148 216 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 PAX9P55771 341 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 CCL8P80075 99 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 NHLH2Q02577 135 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 MST1LQ2TV78 715 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 FAM53AQ6NSI3 398 aaPredicted RBP14.02□□□□□ -0.17
PTPRC-206ENST00000413409 Q6ZRM9 215 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 STX12Q86Y82 276 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 SPAG16Q8N0X2 631 aa14.02□□□□□ -0.17
PTPRC-206ENST00000413409 LINC00052Q96N35 136 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 1053.1 ms