RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.43
CHMP3-203ENST00000409225 PNMA8CA0A1B0GUJ8 204 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 DCKP27707 260 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 PRSS8Q16651 343 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 IDO2Q6ZQW0 420 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 NKAIN3Q8N8D7 197 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 UXS1Q8NBZ7 420 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 NECAP1Q8NC96 275 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 ACOT12Q8WYK0 555 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 DERL3Q96Q80 235 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 KCNK15Q9H427 330 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 PLEKHJ1Q9NW61 149 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 RDH8Q9NYR8 311 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 CLEC2DQ9UHP7 191 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 AK3Q9UIJ7 227 aa12.39□□□□□ -0.43
CHMP3-203ENST00000409225 EXOSC1Q9Y3B2 195 aaKnown RBP12.39□□□□□ -0.43
CHMP3-203ENST00000409225 DYNC1H1Q14204 4646 aaKnown RBP12.38□□□□□ -0.43
CHMP3-203ENST00000409225 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 ZNF320A2RRD8 509 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 TMEM213A2RRL7 107 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 TMEM177Q53S58 311 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 CBR4Q8N4T8 237 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-203ENST00000409225 RNF183Q96D59 192 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 RIMS4Q9H426 269 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-203ENST00000409225 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 DNAH2Q9P225 4427 aa12.38□□□□□ -0.43
CHMP3-203ENST00000409225 IGKV1-6A0A0C4DH72 117 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 UBE2CO00762 179 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 UBBP0CG47 229 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 ARL3P36405 182 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 FAM209BQ5JX69 171 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 GPHB5Q86YW7 130 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 TEX45Q8NA69 505 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 OR1L6Q8NGR2 347 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 PYDC1Q8WXC3 89 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 OR2D2Q9H210 308 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 MGAT4AQ9UM21 535 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 DNAH17Q9UFH2 4485 aa12.37□□□□□ -0.43
CHMP3-203ENST00000409225 A0A0A6YYD4 124 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 MYL12AP19105 171 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 UBE2KP61086 200 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 RBPMS2Q6ZRY4 209 aaKnown RBP12.36□□□□□ -0.43
CHMP3-203ENST00000409225 C19orf35Q6ZS72 473 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 TTC9CQ8N5M4 171 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 STPG3Q8N7X2 389 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 FBLIM1Q8WUP2 373 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 GGHQ92820 318 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 TM2D1Q9BX74 207 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 Q9N2K0 584 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 SDHAF2Q9NX18 166 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 FBXL17Q9UF56 701 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 S4R3C0 116 aa12.36□□□□□ -0.43
CHMP3-203ENST00000409225 LOC100130705A0A1B0GUX0 176 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 MAP2K4P45985 399 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
CHMP3-203ENST00000409225 UNC119Q13432 240 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 FAM106AQ4KMX7 169 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 C10orf55Q5SWW7 151 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 CLEC19AQ6UXS0 136 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 OR2C3Q8N628 320 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 C5orf30Q96GV9 206 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 FBXL7Q9UJT9 491 aa12.35□□□□□ -0.43
CHMP3-203ENST00000409225 A8MWP6 167 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 SOCS1O15524 211 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 WBP4O75554 376 aaKnown RBP12.34□□□□□ -0.43
CHMP3-203ENST00000409225 CD3GP09693 182 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 MED14OSP0DP75 135 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 CTRB1P17538 263 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 RPL35AP18077 110 aaKnown RBP12.34□□□□□ -0.43
CHMP3-203ENST00000409225 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
CHMP3-203ENST00000409225 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 CTRB2Q6GPI1 263 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 SLC38A6Q8IZM9 456 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 CCDC140Q96MF4 163 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 ZNF430Q9H8G1 570 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-203ENST00000409225 DIMT1Q9UNQ2 313 aaKnown RBP12.34□□□□□ -0.43
CHMP3-203ENST00000409225 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
CHMP3-203ENST00000409225 TRAV25A0A0B4J276 109 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 KIR2DL5BA0A0G2JN68 375 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 KIR2DL5BA0A0G2JPC4 375 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 HMX3A6NHT5 357 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 ACTL6BO94805 426 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 CRYZL1O95825 349 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 IFNA4P05014 189 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 RRASP10301 218 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 FCGR2BP31994 310 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-203ENST00000409225 RBMS2Q15434 407 aaKnown RBP12.33□□□□□ -0.44
CHMP3-203ENST00000409225 OR4A47Q6IF82 309 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 CEACAM19Q7Z692 300 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 SLC25A42Q86VD7 318 aa12.33□□□□□ -0.44
CHMP3-203ENST00000409225 KIR2DL5AQ8N109 375 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms