RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 OR4F5Q8NH21 305 aa17.26■□□□□ 0.35
CLK3-202ENST00000395066 TMEM37Q8WXS4 190 aa17.26■□□□□ 0.35
CLK3-202ENST00000395066 OR4F4Q96R69 305 aa17.26■□□□□ 0.35
CLK3-202ENST00000395066 FUT9Q9Y231 359 aa17.26■□□□□ 0.35
CLK3-202ENST00000395066 ZNF124Q15973 351 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 ANAPC16Q96DE5 110 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 MSL2Q9HCI7 577 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 CTXND1A0A1B0GTU2 59 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 TMEM30CPA0ZSE6 113 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 LRRC30A6NM36 301 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 RAC2P15153 192 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 CD46P15529 392 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 ACTL10Q5JWF8 245 aa17.25■□□□□ 0.35
CLK3-202ENST00000395066 LINC00473A8K010 186 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
CLK3-202ENST00000395066 SPCS3P61009 180 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 TGIF2LXQ8IUE1 241 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 C11orf53Q8IXP5 236 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 CNEP1R1Q8N9A8 125 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 OR5T1Q8NG75 326 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 BDP1A6H8Y1 2624 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 FAM90A26D6RGX4 464 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 IGHV3-13P01766 116 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 IGHV3-7P01780 117 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 CD59P13987 128 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 FFAR4Q5NUL3 377 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 OR10G9Q8NGN4 311 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 OR10G7Q8NGN6 311 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 OR2T10Q8NGZ9 312 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 MANBALQ9NQG1 85 aa17.24■□□□□ 0.35
CLK3-202ENST00000395066 GYPAP02724 150 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 MRPL49Q13405 166 aaKnown RBP17.23■□□□□ 0.35
CLK3-202ENST00000395066 DTD1Q8TEA8 209 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 TMEM18Q96B42 140 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 PMS2P5A8MQ11 134 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 RNF212BA8MTL3 300 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 GGCTO75223 188 aaKnown RBP17.23■□□□□ 0.35
CLK3-202ENST00000395066 P0C879 139 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 ACOT6Q3I5F7 207 aaPredicted RBP17.23■□□□□ 0.35
CLK3-202ENST00000395066 OR13A1Q8NGR1 328 aa17.23■□□□□ 0.35
CLK3-202ENST00000395066 SMG1Q96Q15 3661 aaKnown RBP17.23■□□□□ 0.35
CLK3-202ENST00000395066 IQCF6A8MYZ5 107 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 EGR1P18146 543 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 EIF4EBP1Q13541 118 aaPredicted RBP17.22■□□□□ 0.35
CLK3-202ENST00000395066 GCSAMLQ5JQS6 135 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 AURKAIP1Q9NWT8 199 aaPredicted RBP17.22■□□□□ 0.35
CLK3-202ENST00000395066 OR6C3Q9NZP0 311 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 FABP6P51161 128 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 NINJ1Q92982 152 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 TRIB1Q96RU8 372 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 FAM234AQ9H0X4 552 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 PSG11Q9UQ72 335 aa17.22■□□□□ 0.35
CLK3-202ENST00000395066 MBP02144 154 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 SRP14P37108 136 aaKnown RBP17.21■□□□□ 0.35
CLK3-202ENST00000395066 SRSF6Q13247 344 aaKnown RBP17.21■□□□□ 0.35
CLK3-202ENST00000395066 EDDM3AQ14507 147 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 MRPL41Q8IXM3 137 aaKnown RBP17.21■□□□□ 0.35
CLK3-202ENST00000395066 CISD2Q8N5K1 135 aaKnown RBP17.21■□□□□ 0.35
CLK3-202ENST00000395066 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.21■□□□□ 0.35
CLK3-202ENST00000395066 TCAPO15273 167 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 PAGE4O60829 102 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 TYMSP04818 313 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 GNB2P62879 340 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 MSMO1Q15800 293 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 HES3Q5TGS1 186 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 TMEM147Q9BVK8 224 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 HES4Q9HCC6 221 aa17.21■□□□□ 0.35
CLK3-202ENST00000395066 CDX4O14627 284 aaPredicted RBP17.2■□□□□ 0.34
CLK3-202ENST00000395066 RAB4BP61018 213 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 PRSS8Q16651 343 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 H2BFWTQ7Z2G1 175 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 OR10P1Q8NGE3 313 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 NEU1Q99519 415 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 NPCDR1Q9BY65 106 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 WASF3Q9UPY6 502 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 OOEPA6NGQ2 149 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 C1QTNF9BB2RNN3 333 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 COL8A2P25067 703 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 CCKARP32238 428 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 GABRA6Q16445 453 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 ATP6V1FQ16864 119 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 ALKBH2Q6NS38 261 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 NEIL1Q96FI4 390 aaPredicted RBP17.2■□□□□ 0.34
CLK3-202ENST00000395066 GMPPAQ96IJ6 420 aaPredicted RBP17.2■□□□□ 0.34
CLK3-202ENST00000395066 FER1L6-AS2Q96M78 137 aa17.2■□□□□ 0.34
CLK3-202ENST00000395066 HEATR1Q9H583 2144 aaKnown RBP17.2■□□□□ 0.34
CLK3-202ENST00000395066 EREGO14944 169 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 VENTXO95231 258 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 CRYAAP02489 173 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 OR4A8P0C604 315 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 NUTF2P61970 127 aaKnown RBP17.19■□□□□ 0.34
CLK3-202ENST00000395066 PAX5Q02548 391 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 VWA1Q6PCB0 445 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 WDR82Q6UXN9 313 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 ACP7Q6ZNF0 438 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 ZNF883P0CG24 379 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 COX5AP20674 150 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 SOX8P57073 446 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 TGFBR3Q03167 851 aa17.19■□□□□ 0.34
CLK3-202ENST00000395066 CATR1Q13166 79 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms