RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GATAD1Q8WUU5 269 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 NABP2Q9BQ15 211 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 KLF4O43474 513 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 TSPAN2O60636 221 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 IL11P20809 199 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 NUTF2P61970 127 aaKnown RBP10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 DLL3Q9NYJ7 618 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 USP54Q70EL1 1684 aa10.92□□□□□ -0.66
SYNCRIP-201ENST00000355238 PSG9Q00887 426 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 FBXW9Q5XUX1 488 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 NPCDR1Q9BY65 106 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 HEXA-AS1Q9H8Q6 139 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 SLX4Q8IY92 1834 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 ID1P41134 155 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 CIRBPQ14011 172 aaKnown RBP10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 GFRALQ6UXV0 394 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 STPG3Q8N7X2 389 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 ST6GALNAC3Q8NDV1 305 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 RND1Q92730 232 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 NRN1Q9NPD7 142 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 RAXQ9Y2V3 346 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 IGKV1-8A0A0C4DH67 115 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 COL9A1P20849 921 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 GPX4P36969 197 aaPredicted RBP10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 Q6ZS52 159 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 ANOS1P23352 680 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 MDP1Q86V88 176 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 WNT5BQ9H1J7 359 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 CLEC1BQ9P126 229 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 EGR1P18146 543 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 TCF23Q7RTU1 214 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST1H2BLQ99880 126 aa10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 SSBP3Q9BWW4 388 aaPredicted RBP10.91□□□□□ -0.66
SYNCRIP-201ENST00000355238 SERF1AO75920 110 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 GPR183P32249 361 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 SRSF3P84103 164 aaKnown RBP10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 MBD3L1Q8WWY6 194 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 SIGMAR1Q99720 223 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 TMUB1Q9BVT8 246 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 RTN4RQ9BZR6 473 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 COLCA2A8K830 154 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 PRSS2P07478 247 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 CDK5RAP2Q96SN8 1893 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 PLAUP00749 431 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 ICAM4Q14773 271 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 SPINK14Q6IE38 97 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 FAM53AQ6NSI3 398 aaPredicted RBP10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 SYT8Q8NBV8 401 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 RAB1BQ9H0U4 201 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 MIA3Q5JRA6 1907 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 SLC17A3O00476 420 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 STARD6P59095 220 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 P2RY6Q15077 328 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 OR4A5Q8NH83 315 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 RNF126Q9BV68 326 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 TCF19Q9Y242 345 aa10.9□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF646O15015 1829 aaPredicted RBP10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PPE3 182 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 DLEU1O43261 78 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 MPV17P39210 176 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 RND2P52198 227 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 KLRB1Q12918 225 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 MMDQ15546 238 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 TBR1Q16650 682 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 LHX8Q68G74 356 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 BEND2Q8NDZ0 799 aa10.9□□□□□ -0.67
SYNCRIP-201ENST00000355238 NPIPB13A6NJU9 1138 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 NPIPB4C9JG80 1138 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 GDF9O60383 454 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 SNRPCP09234 159 aaKnown RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 TM2D1Q9BX74 207 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 PLA2G2FQ9BZM2 168 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 MRPS16Q9Y3D3 137 aaKnown RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 AHDC1Q5TGY3 1603 aaPredicted RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 ASCC3Q8N3C0 2202 aaKnown RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 ZNF146Q15072 292 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 ASPHD2Q6ICH7 369 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 IGHV3OR15-7A0A075B7D8 119 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 TRAV9-2A0A087WT02 112 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 LDLRAD2Q5SZI1 272 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 ST6GALNAC6Q969X2 333 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 C2CD4DB7Z1M9 353 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 ZNF418Q8TF45 676 aaPredicted RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 GPHA2Q96T91 129 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 SLC25A10Q9UBX3 287 aaPredicted RBP10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 IGKV1D-42A0A075B6H8 117 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1B0GW15 77 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 H3BUT2 72 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 APELAP0DMC3 54 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 LY6G6FQ5SQ64 297 aa10.89□□□□□ -0.67
SYNCRIP-201ENST00000355238 CCDC144NLQ6NUI1 221 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 343.9 ms