RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 FAM90A13PP0C7W8 464 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 FAM90A14PP0C7W9 464 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 FAM90A24PP0C7X0 464 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 HES3Q5TGS1 186 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 PSMF1Q92530 271 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 FOXJ2Q9P0K8 574 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 USF3Q68DE3 2245 aa13.5□□□□□ -0.25
CRAT-201ENST00000318080 CBLN1P23435 193 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 PSMB3P49720 205 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 LINC00310P59036 64 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 RPL15P61313 204 aaKnown RBP13.49□□□□□ -0.25
CRAT-201ENST00000318080 TFF3Q07654 80 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
CRAT-201ENST00000318080 WDR1O75083 606 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
CRAT-201ENST00000318080 IFNA1P01562 189 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 P04436 131 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
CRAT-201ENST00000318080 RIPPLY2Q5TAB7 128 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 DLL3Q9NYJ7 618 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 MED12LQ86YW9 2145 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 CDKN1BP46527 198 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 ATP5G3P48201 142 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 IL11RAQ14626 422 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 ASCL5Q7RTU5 278 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 CMTM2Q8TAZ6 248 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 KCNS2Q9ULS6 477 aa13.49□□□□□ -0.25
CRAT-201ENST00000318080 CBY3A6NI87 242 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 MT-CO3P00414 261 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 CELA3AP09093 270 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 CTXN2P0C2S0 81 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 CD82P27701 267 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
CRAT-201ENST00000318080 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
CRAT-201ENST00000318080 ERASQ7Z444 233 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 PIP4P1Q86T03 277 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 VASH2Q86V25 355 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 GTF3C1Q12789 2109 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 A6NJY4 79 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 C9orf172C9J069 976 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 SPINK4O60575 86 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 MRPL33O75394 65 aaKnown RBP13.48□□□□□ -0.25
CRAT-201ENST00000318080 CLDN1O95832 211 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 GDF1P27539 372 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 TGFBR3Q03167 851 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 SLC38A11Q08AI6 406 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 TPTE2P1Q5T6R2 138 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 PSMG3Q9BT73 122 aaPredicted RBP13.48□□□□□ -0.25
CRAT-201ENST00000318080 ZNF703Q9H7S9 590 aaPredicted RBP13.48□□□□□ -0.25
CRAT-201ENST00000318080 RBM7Q9Y580 266 aaKnown RBP13.48□□□□□ -0.25
CRAT-201ENST00000318080 DNAJC13O75165 2243 aa13.48□□□□□ -0.25
CRAT-201ENST00000318080 AQP7O14520 342 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 RBFOX2O43251 390 aaKnown RBP eCLIP13.47□□□□□ -0.25
CRAT-201ENST00000318080 DNPH1O43598 174 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 SMPD2O60906 423 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 SERF1AO75920 110 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 SPATA46Q5T0L3 261 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 TUSC5Q8IXB3 177 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 CISD2Q8N5K1 135 aaKnown RBP13.47□□□□□ -0.25
CRAT-201ENST00000318080 OR10G9Q8NGN4 311 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 OR10G7Q8NGN6 311 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 SGMS2Q8NHU3 365 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 MIEN1Q9BRT3 115 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 TMEM106BQ9NUM4 274 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 NDUFB4O95168 129 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
CRAT-201ENST00000318080 OTX2P32243 289 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 NBL1P41271 181 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 RAB7AP51149 207 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 OR2Y1Q8NGV0 311 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 KCNE4Q8WWG9 221 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 CLN8Q9UBY8 286 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 RNF150Q9ULK6 438 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 RPH3ALQ9UNE2 315 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 CEP295Q9C0D2 2601 aa13.47□□□□□ -0.25
CRAT-201ENST00000318080 MGAQ8IWI9 3026 aa13.46□□□□□ -0.25
CRAT-201ENST00000318080 SIRPB1O00241 398 aa13.46□□□□□ -0.25
CRAT-201ENST00000318080 RAMP3O60896 148 aa13.46□□□□□ -0.25
CRAT-201ENST00000318080 SPINK14Q6IE38 97 aa13.46□□□□□ -0.25
CRAT-201ENST00000318080 CENPVQ7Z7K6 275 aaPredicted RBP13.46□□□□□ -0.25
CRAT-201ENST00000318080 SH2D1BO14796 132 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 WNT2P09544 360 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 SERF2P84101 59 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 FFAR4Q5NUL3 377 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 SAXO1Q8IYX7 474 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 FAM58AQ8N1B3 248 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 STPG4Q8N801 248 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 ZNF709Q8N972 641 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 AGMATQ9BSE5 352 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 ZDHHC11Q9H8X9 412 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 PXMP4Q9Y6I8 212 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.26
CRAT-201ENST00000318080 C11orf94C9JXX5 98 aa13.45□□□□□ -0.26
CRAT-201ENST00000318080 SLC17A3O00476 420 aa13.45□□□□□ -0.26
CRAT-201ENST00000318080 YPEL1O60688 119 aa13.45□□□□□ -0.26
CRAT-201ENST00000318080 SLC25A6P12236 298 aa13.45□□□□□ -0.26
CRAT-201ENST00000318080 CA6P23280 308 aa13.45□□□□□ -0.26
CRAT-201ENST00000318080 CHRNB4P30926 498 aa13.45□□□□□ -0.26
CRAT-201ENST00000318080 GNB1P62873 340 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms