RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 C20orf144Q9BQM9 153 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 RAB7AP51149 207 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 LINC00310P59036 64 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 CIB3Q96Q77 187 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-202ENST00000310645 SLC35B1P78383 322 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-202ENST00000310645 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 H2BFWTQ7Z2G1 175 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 OR1L6Q8NGR2 347 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 DEPPQ9NTK1 212 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 FOXJ2Q9P0K8 574 aa12.33□□□□□ -0.44
COL6A2-202ENST00000310645 NBEAQ8NFP9 2946 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 FAM90A26D6RGX4 464 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 UBE2NP61088 152 aaKnown RBP12.32□□□□□ -0.44
COL6A2-202ENST00000310645 PAFAH1B2P68402 229 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 SIGLECL1Q8N7X8 197 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 OR52L2PQ8NGH6 319 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 RNF114Q9Y508 228 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 PMS2P5A8MQ11 134 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 SNURFLB1AK76 121 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 YPEL1O60688 119 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 RAC2P15153 192 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 CHRNB4P30926 498 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 LHX2P50458 406 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 GAGE1Q13065 139 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 NCKAP5O14513 1909 aa12.32□□□□□ -0.44
COL6A2-202ENST00000310645 RNF212BA8MTL3 300 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 PMCHP20382 165 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 COL5A1-AS1Q5SY13 56 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 KCNE4Q8WWG9 221 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 DEFB108AA8MXU0 73 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 TOX3O15405 576 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-202ENST00000310645 LINC00614P0C842 121 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 CD99P14209 185 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 LTC4SQ16873 150 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 TXN2Q99757 166 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 KNTC1P50748 2209 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 IGHV3-43A0A0B4J1X8 118 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 DIRC3C9JPN6 131 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 SH2D1BO14796 132 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 DNPH1O43598 174 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 NXPH2O95156 264 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 IGHEP01854 428 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 IL6RP08887 468 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-202ENST00000310645 IGHV3-43DP0DP04 118 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 TIMP3P35625 211 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 GNG10P50151 68 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 PLP2Q04941 152 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 Q6P435 159 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 QTRT1Q9BXR0 403 aaKnown RBP12.31□□□□□ -0.44
COL6A2-202ENST00000310645 KCNIP2Q9NS61 270 aa12.31□□□□□ -0.44
COL6A2-202ENST00000310645 TMPRSS2O15393 492 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 TFF1P04155 84 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 CCL4P13236 92 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 CD1BP29016 333 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 RANP62826 216 aaKnown RBP12.3□□□□□ -0.44
COL6A2-202ENST00000310645 PDLIM3Q53GG5 364 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-202ENST00000310645 MIC13Q5XKP0 118 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 Q6ZVH6 145 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 RFESDQ8TAC1 157 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 CDIPTO14735 213 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 OTX2P32243 289 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 FAM234AQ9H0X4 552 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 AQP7O14520 342 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 GRPP07492 148 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 AMTP48728 403 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 YPEL3P61236 119 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-202ENST00000310645 HTD2P86397 168 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 KCNIP1Q9NZI2 227 aa12.3□□□□□ -0.44
COL6A2-202ENST00000310645 ZNF497Q6ZNH5 498 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 TPRX1Q8N7U7 411 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 ADAMTS20P59510 1910 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 PRRC2CQ9Y520 2896 aaKnown RBP12.29□□□□□ -0.44
COL6A2-202ENST00000310645 PINLYPA6NC86 204 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 KLF7O75840 302 aaPredicted RBP12.29□□□□□ -0.44
COL6A2-202ENST00000310645 TCL1AP56279 114 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
COL6A2-202ENST00000310645 SPATA45Q537H7 98 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 LINC00596Q86U02 117 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 C5orf30Q96GV9 206 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 SH2D2AQ9NP31 389 aa12.29□□□□□ -0.44
COL6A2-202ENST00000310645 LOC102723996A0A087X1L8 192 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms