RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 Q8IYB0 196 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 FLYWCH2Q96CP2 140 aaKnown RBP13.38□□□□□ -0.27
USP43-201ENST00000285199 P2RX4Q99571 388 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 RAB9BQ9NP90 201 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 ZSWIM8A7E2V4 1837 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 A0A0G2JMM0 328 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 A0A1W2PPB8 328 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 A0A1W2PRS3 328 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 KIR3DP1A8MWS1 328 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 LIME1Q9H400 295 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
USP43-201ENST00000285199 SNAI2O43623 268 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 NPY1RP25929 384 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 RPL31P62899 125 aaKnown RBP13.37□□□□□ -0.27
USP43-201ENST00000285199 RPL24P83731 157 aaKnown RBP13.37□□□□□ -0.27
USP43-201ENST00000285199 RTL8BQ17RB0 113 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 ABLIM2Q6H8Q1 611 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 ZNF525Q8N782 197 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 TCFL5Q9UL49 500 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 CHD3Q12873 2000 aaKnown RBP13.37□□□□□ -0.27
USP43-201ENST00000285199 MEOX1P50221 254 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 FOXA3P55318 350 aaPredicted RBP13.37□□□□□ -0.27
USP43-201ENST00000285199 STARD6P59095 220 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 NHLH1Q02575 133 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 MZT1Q08AG7 82 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 ZNF355PQ9NSJ1 428 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 IFI6P09912 130 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 UQCRFS1P47985 274 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 RAB7AP51149 207 aa13.37□□□□□ -0.27
USP43-201ENST00000285199 ARSJQ5FYB0 599 aaPredicted RBP13.37□□□□□ -0.27
USP43-201ENST00000285199 QTRT1Q9BXR0 403 aaKnown RBP13.37□□□□□ -0.27
USP43-201ENST00000285199 TMSB15BA0A087X1C1 80 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 MT-CO3P00414 261 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 HTR1DP28221 377 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 GABRA6Q16445 453 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 TMEM178AQ8NBL3 297 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 NCOA6Q14686 2063 aaPredicted RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 A0A087WWC5 75 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 ODAMA1E959 279 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 EREGO14944 169 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 APCSP02743 223 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 OR5AL1P0C617 328 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 GATA2P23769 480 aaPredicted RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 MRPS11P82912 194 aaKnown RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 IL11RAQ14626 422 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 DHRS13Q6UX07 377 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 SFRP2Q96HF1 295 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 SERF1AO75920 110 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 CXorf1O96002 111 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 CELA3AP09093 270 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 IL3RAP26951 378 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 FOXG1P55316 489 aaPredicted RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 TEPPQ6URK8 271 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 CPEB3Q8NE35 698 aaKnown RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 PRSS3P2Q8NHM4 247 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
USP43-201ENST00000285199 FER1L6-AS2Q96M78 137 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 DERL1Q9BUN8 251 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 CLDN16Q9Y5I7 305 aa13.36□□□□□ -0.27
USP43-201ENST00000285199 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 hCG_38984A0A1B0GV85 526 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 MARCH11A6NNE9 402 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 MPZP25189 248 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 LINC00205P59089 165 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 LURAP1LQ8IV03 231 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 FBLN5Q9UBX5 448 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 BRCA2P51587 3418 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 TANC1Q9C0D5 1861 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 CLPSP04118 112 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 ID3Q02535 119 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 CFHR1Q03591 330 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 CHCHD2Q9Y6H1 151 aaPredicted RBP13.35□□□□□ -0.27
USP43-201ENST00000285199 FREM1Q5H8C1 2179 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 C17orf98A8MV24 154 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 SRSF4Q08170 494 aaKnown RBP13.35□□□□□ -0.27
USP43-201ENST00000285199 LRRC75BQ2VPJ9 315 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 DEPPQ9NTK1 212 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 TMEM140Q9NV12 185 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 SYNGR3O43761 229 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 TNFSF15O95150 251 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 SRP14P37108 136 aaKnown RBP13.35□□□□□ -0.27
USP43-201ENST00000285199 LBHQ53QV2 105 aaPredicted RBP13.35□□□□□ -0.27
USP43-201ENST00000285199 OR1B1Q8NGR6 318 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 OR2T6Q8NHC8 308 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 WIPI2Q9Y4P8 454 aa13.35□□□□□ -0.27
USP43-201ENST00000285199 SPG11Q96JI7 2443 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 OOEPA6NGQ2 149 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 RAMP3O60896 148 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 FA2HQ7L5A8 372 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 OR6C3Q9NZP0 311 aa13.34□□□□□ -0.27
USP43-201ENST00000285199 ANAPC1Q9H1A4 1944 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms