RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ATP6V0CP27449 155 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 PRSS53Q2L4Q9 553 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 ZNF385CQ66K41 422 aaPredicted RBP9.85□□□□□ -0.83
PTPN4-201ENST00000263708 OR2K2Q8NGT1 345 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 SPSB4Q96A44 273 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 NRIP2Q9BQI9 281 aa9.85□□□□□ -0.83
PTPN4-201ENST00000263708 HLA-DQA1P01909 254 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 IL9P15248 144 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 SELENOTP62341 195 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 PEAR1Q5VY43 1037 aaPredicted RBP9.84□□□□□ -0.83
PTPN4-201ENST00000263708 MIC13Q5XKP0 118 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 SRIP30626 198 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 SNAI3Q3KNW1 292 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 ITLN1Q8WWA0 313 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 PKD1L3Q7Z443 1732 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 KLK8O60259 260 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 F12P00748 615 aaPredicted RBP9.84□□□□□ -0.83
PTPN4-201ENST00000263708 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 FOXB2Q5VYV0 432 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 H1FOOQ8IZA3 346 aaPredicted RBP9.84□□□□□ -0.83
PTPN4-201ENST00000263708 QTRT1Q9BXR0 403 aaKnown RBP9.84□□□□□ -0.83
PTPN4-201ENST00000263708 SLC6A13Q9NSD5 602 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 OR5AC2Q9NZP5 309 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 CASP8AP2Q9UKL3 1982 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 HOXA5P20719 270 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 VKORC1L1Q8N0U8 176 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 APOMO95445 188 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 LIFP15018 202 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 RPP25Q9BUL9 199 aaKnown RBP9.84□□□□□ -0.83
PTPN4-201ENST00000263708 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 CALYQ9NYX4 217 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 SYNGR3O43761 229 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 MZB1Q8WU39 189 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 C7orf66A4D0T2 115 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 UCP2P55851 309 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 C10orf111Q8N326 155 aa9.84□□□□□ -0.83
PTPN4-201ENST00000263708 PLXNB2O15031 1838 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 RUNX1Q01196 453 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 ASPDHA6ND91 283 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 MMD2Q8IY49 270 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 DNAJC4Q9NNZ3 241 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 FGF11Q92914 225 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 SCGB3A1Q96QR1 104 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 OR51M1Q9H341 326 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 CFDP00746 253 aaPredicted RBP9.83□□□□□ -0.84
PTPN4-201ENST00000263708 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 SEMA5BQ9P283 1151 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 TRBV5-4A0A0C4DH59 114 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 OR11H12B2RN74 326 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 LCN2P80188 198 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 PAX2Q02962 417 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 CLPPQ16740 277 aaPredicted RBP9.83□□□□□ -0.84
PTPN4-201ENST00000263708 DCAF10Q5QP82 559 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 OR11H2Q8NH07 326 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 ABHD1Q96SE0 405 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 MMP16P51512 607 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 RARRES2Q99969 163 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 CA1P00915 261 aaPredicted RBP9.83□□□□□ -0.84
PTPN4-201ENST00000263708 MT-ND6P03923 174 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 STHQ8IWL8 128 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 ASIPP42127 132 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 C1QL3Q5VWW1 255 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 LEMD1Q68G75 181 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 R3HDMLQ9H3Y0 253 aa9.83□□□□□ -0.84
PTPN4-201ENST00000263708 KCNE1BA0A087WTH5 132 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 PSCAO43653 123 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 GHRHP01286 108 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 ASAH2BP0C7U1 165 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 GTSCR1Q86UQ5 136 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 LINC01555Q8NAE3 123 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 CHST5Q9GZS9 411 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 A0A1B0GWB2 263 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 SDF2L1Q9HCN8 221 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 FGF9P31371 208 aaPredicted RBP9.82□□□□□ -0.84
PTPN4-201ENST00000263708 KIAA1644Q3SXP7 199 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 GCSAMQ8N6F7 178 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 WNT10AQ9GZT5 417 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 MUC1P15941 1255 aaPredicted RBP9.82□□□□□ -0.84
PTPN4-201ENST00000263708 S4R3C0 116 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 KIAA2026Q5HYC2 2103 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 CDC42EP2O14613 210 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 ZIC3O60481 467 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 TRGC2P03986 189 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 HSPB1P04792 205 aaKnown RBP9.82□□□□□ -0.84
PTPN4-201ENST00000263708 MRPL20Q9BYC9 149 aaKnown RBP9.82□□□□□ -0.84
PTPN4-201ENST00000263708 FLRT3Q9NZU0 649 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 RNF115Q9Y4L5 304 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 MUC21A0A0G2JKD1 596 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 MUC21A0A140T8X8 626 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 MUC21Q5SSG8 566 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 ABHD12Q8N2K0 398 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 IDI2-AS1Q9NZ38 188 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 DDX60LQ5H9U9 1706 aaKnown RBP9.82□□□□□ -0.84
PTPN4-201ENST00000263708 KLK2P20151 261 aa9.82□□□□□ -0.84
PTPN4-201ENST00000263708 WDR82Q6UXN9 313 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms