RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 LIPFP07098 398 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 FAM71F2Q6NXP2 309 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 OR2C3Q8N628 320 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 LY6G5BQ8NDX9 201 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 OR10X1Q8NGY0 326 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 STOML3Q8TAV4 291 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 CCL19Q99731 98 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 SLC25A32Q9H2D1 315 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 NARFLQ9H6Q4 476 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 ZNRD1Q9P1U0 126 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 MALRD1Q5VYJ5 2156 aa14.83□□□□□ -0.04
VIM-201ENST00000224237 AANATQ16613 207 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 PDZD9Q8IXQ8 264 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 ZNF383Q8NA42 475 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 TNFRSF14Q92956 283 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 LYRM2Q9NU23 88 aaPredicted RBP14.82□□□□□ -0.04
VIM-201ENST00000224237 CHST1O43916 411 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 TPT1P13693 172 aaKnown RBP14.82□□□□□ -0.04
VIM-201ENST00000224237 NQO2P16083 231 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 CAV2P51636 162 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 ARHGDIBP52566 201 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 MIDNQ504T8 468 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 ABHD12Q8N2K0 398 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 TMEM186Q96B77 213 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 RAB40CQ96S21 281 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 CYTL1Q9NRR1 136 aa14.82□□□□□ -0.04
VIM-201ENST00000224237 FAM90A9PA6NNJ1 464 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 C22orf46C9J442 243 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 SYNGR2O43760 224 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 CT45A6P0DMU7 189 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 CT45A5P0DMU8 189 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 CT45A7P0DMV0 189 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 ERVK-16P61578 105 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 TOR2AQ5JU69 321 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 SLC25A31Q9H0C2 315 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.81□□□□□ -0.04
VIM-201ENST00000224237 SPG11Q96JI7 2443 aa14.81□□□□□ -0.04
VIM-201ENST00000224237 ASH1LQ9NR48 2969 aaKnown RBP14.8□□□□□ -0.04
VIM-201ENST00000224237 SHOXO15266 292 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 ZNF137PP52743 207 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 ZNF525Q8N782 197 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 FBXL17Q9UF56 701 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 PFDN2Q9UHV9 154 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 WSB1Q9Y6I7 421 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 TENM4Q6N022 2769 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 I3L521 148 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 CRYZL1O95825 349 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 IL3RAP26951 378 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 RPL23AP62750 156 aaKnown RBP14.8□□□□□ -0.04
VIM-201ENST00000224237 EIF5AP63241 154 aaKnown RBP14.8□□□□□ -0.04
VIM-201ENST00000224237 TAGLNQ01995 201 aaKnown RBP14.8□□□□□ -0.04
VIM-201ENST00000224237 RTL8BQ17RB0 113 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 DHRS7BQ6IAN0 325 aaPredicted RBP14.8□□□□□ -0.04
VIM-201ENST00000224237 ONECUT1Q9UBC0 465 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 HSPB7Q9UBY9 170 aa14.8□□□□□ -0.04
VIM-201ENST00000224237 USP9YO00507 2555 aaPredicted RBP14.79□□□□□ -0.04
VIM-201ENST00000224237 LOC105371242A0A075B767 164 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 IGHV2-26A0A0B4J1V2 119 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 IGHV4-39P01824 125 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 COX6B1P14854 86 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 EWSR1Q01844 656 aaKnown RBP eCLIP14.79□□□□□ -0.04
VIM-201ENST00000224237 TNFRSF9Q07011 255 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 SP5Q6BEB4 398 aaPredicted RBP14.79□□□□□ -0.04
VIM-201ENST00000224237 CCDC28AQ8IWP9 274 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 BAP18Q8IXM2 172 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 REG4Q9BYZ8 158 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 SLC35D1Q9NTN3 355 aa14.79□□□□□ -0.04
VIM-201ENST00000224237 FAM24AA6NFZ4 105 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 RBMXL2O75526 392 aaKnown RBP14.78□□□□□ -0.04
VIM-201ENST00000224237 MED6O75586 246 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 JTBO76095 146 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 TMEM50AO95807 157 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 IGHV2-5P01817 119 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 GAPDHP04406 335 aaKnown RBP14.78□□□□□ -0.04
VIM-201ENST00000224237 PAX9P55771 341 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 UBE2KP61086 200 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 BAXQ07812 192 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 TMEM252Q8N6L7 170 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 ST6GALNAC6Q969X2 333 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 CLEC7AQ9BXN2 247 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 MRPL20Q9BYC9 149 aaKnown RBP14.78□□□□□ -0.04
VIM-201ENST00000224237 MFSD2BA6NFX1 497 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 M0R1W7 72 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 APOA2P02652 100 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 COL8A1P27658 744 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 PDLIM4P50479 330 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 PRRX1P54821 245 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 TAS2R30P59541 319 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 NHLH2Q02577 135 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 SSX9Q7RTT3 188 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 NRGNQ92686 78 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 BPESC1Q9GZL8 116 aa14.78□□□□□ -0.04
VIM-201ENST00000224237 IGSF23A1L1A6 192 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 HRASP01112 189 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 HLA-DRB5Q30154 266 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 RPL7L1Q6DKI1 246 aaKnown RBP14.77□□□□□ -0.05
VIM-201ENST00000224237 CLEC9AQ6UXN8 241 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 EIF4E3Q8N5X7 224 aaKnown RBP14.77□□□□□ -0.05
VIM-201ENST00000224237 BEND2Q8NDZ0 799 aa14.77□□□□□ -0.05
VIM-201ENST00000224237 OR5AN1Q8NGI8 311 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms