RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SLC25A16P16260 332 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 TMEM268Q5VZI3 342 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 EIF5AL1Q6IS14 154 aaKnown RBP14.18□□□□□ -0.14
PHGDH-234ENST00000642041 CLEC2AQ6UVW9 174 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 TMUB2Q71RG4 321 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 LRRC20Q8TCA0 184 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 PHYHIPLQ96FC7 376 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 COA4Q9NYJ1 87 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 IDI2-AS1Q9NZ38 188 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 OR1A1Q9P1Q5 309 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 PRELID3BQ9Y3B1 194 aa14.18□□□□□ -0.14
PHGDH-234ENST00000642041 FAM90A26D6RGX4 464 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 RBFOX2O43251 390 aaKnown RBP eCLIP14.17□□□□□ -0.14
PHGDH-234ENST00000642041 ADAP1O75689 374 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 RBP4P02753 201 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 UBA52P62987 128 aaKnown RBP14.17□□□□□ -0.14
PHGDH-234ENST00000642041 C11orf71Q6IPW1 123 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 TEX261Q6UWH6 196 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 SELENOHQ8IZQ5 122 aaKnown RBP14.17□□□□□ -0.14
PHGDH-234ENST00000642041 DRAM1Q8N682 238 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 DEFB108BQ8NET1 73 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 AQP10Q96PS8 301 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 TP53RKQ96S44 253 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 CCL13Q99616 98 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 ARL6Q9H0F7 186 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 GFOD1Q9NXC2 390 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 GSKIPQ9P0R6 139 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 METRNQ9UJH8 293 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 U3KQ87 197 aa14.17□□□□□ -0.14
PHGDH-234ENST00000642041 TRAV14DV4A0A0A6YYC5 116 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 FAM90A9PA6NNJ1 464 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 CCSO14618 274 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 RAB29O14966 203 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 ADAM20O43506 726 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 NDUFB7P17568 137 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 GPR12P47775 334 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 RPL31P62899 125 aaKnown RBP14.16□□□□□ -0.14
PHGDH-234ENST00000642041 FAM71F2Q6NXP2 309 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 HEPN1Q6WQI6 88 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 OR8H1Q8NGG4 311 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 DCUN1D4Q92564 292 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 TNFRSF14Q92956 283 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 OR10C1Q96KK4 312 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 CHODLQ9H9P2 273 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 TANC2Q9HCD6 1990 aa14.16□□□□□ -0.14
PHGDH-234ENST00000642041 PRKDCP78527 4128 aaKnown RBP14.15□□□□□ -0.14
PHGDH-234ENST00000642041 MED6O75586 246 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 DEDDO75618 318 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 NKX2-1P43699 371 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-234ENST00000642041 P2RY1P47900 373 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 COMPP49747 757 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-234ENST00000642041 DEFA6Q01524 100 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 IFITM2Q01629 132 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 SP6Q3SY56 376 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 SLC35G3Q8N808 338 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 C3orf56Q8N813 242 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 OR52L2PQ8NGH6 319 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 RNASE11Q8TAA1 199 aaKnown RBP14.15□□□□□ -0.14
PHGDH-234ENST00000642041 ZNF714Q96N38 554 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 S1PR3Q99500 378 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 ARPC5LQ9BPX5 153 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 SLC25A31Q9H0C2 315 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 OR2D2Q9H210 308 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 UBQLN2Q9UHD9 624 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 POMT1Q9Y6A1 747 aa14.15□□□□□ -0.14
PHGDH-234ENST00000642041 ST8SIA5O15466 376 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 GPR137BO60478 399 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 RRASP10301 218 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 SSTR5P35346 364 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 LOXL3P58215 753 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 SPRNQ5BIV9 151 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 Q5BKY6 102 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 LYZL2Q7Z4W2 148 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 OR51H1Q8NH63 302 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 MBD2Q9UBB5 411 aa14.14□□□□□ -0.15
PHGDH-234ENST00000642041 K7EPK0 472 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 WRBO00258 174 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 BCL2L11O43521 198 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 CXCL2P19875 107 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 USF1P22415 310 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-234ENST00000642041 THBS3P49746 956 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 RAB32Q13637 225 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 LRRC37A5PQ49AS3 106 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 NMSQ5H8A3 153 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 KIAA2026Q5HYC2 2103 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 DHRS7BQ6IAN0 325 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-234ENST00000642041 ZNF680Q8NEM1 530 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 OR8B3Q8NGG8 313 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 CYYR1Q96J86 154 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 OR8B2Q96RD0 313 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 RAB40CQ96S21 281 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 AGMATQ9BSE5 352 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 ABHD14AQ9BUJ0 271 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 PLSCR3Q9NRY6 295 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 RPUSD1Q9UJJ7 312 aaKnown RBP14.13□□□□□ -0.15
PHGDH-234ENST00000642041 MMP24Q9Y5R2 645 aa14.13□□□□□ -0.15
PHGDH-234ENST00000642041 ARFGEF3Q5TH69 2177 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 TRAV39A0A0B4J263 110 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 TSC22D2O75157 780 aa14.12□□□□□ -0.15
PHGDH-234ENST00000642041 ZNF205O95201 554 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms