RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 GUCA2BQ16661 112 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 ZNF880Q6PDB4 577 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 DYNLRB2Q8TF09 96 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 PGLYRP3Q96LB9 341 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 UQCC2Q9BRT2 126 aa15.16■□□□□ 0.02
TARDBP-228ENST00000629725 NAPSAO96009 420 aa15.15■□□□□ 0.02
TARDBP-228ENST00000629725 DEFB114Q30KQ6 69 aa15.15■□□□□ 0.02
TARDBP-228ENST00000629725 NKAIN3Q8N8D7 197 aa15.15■□□□□ 0.02
TARDBP-228ENST00000629725 ZFP41Q8N8Y5 198 aa15.15■□□□□ 0.02
TARDBP-228ENST00000629725 SMPD3Q9NY59 655 aaPredicted RBP15.15■□□□□ 0.02
TARDBP-228ENST00000629725 OR1A1Q9P1Q5 309 aa15.15■□□□□ 0.02
TARDBP-228ENST00000629725 ZNF221Q9UK13 617 aa15.15■□□□□ 0.02
TARDBP-228ENST00000629725 BMPR1BO00238 502 aa15.14■□□□□ 0.01
TARDBP-228ENST00000629725 RBMXL2O75526 392 aaKnown RBP15.14■□□□□ 0.01
TARDBP-228ENST00000629725 APELAP0DMC3 54 aa15.14■□□□□ 0.01
TARDBP-228ENST00000629725 MYL12AP19105 171 aa15.14■□□□□ 0.01
TARDBP-228ENST00000629725 MOB1BQ7L9L4 216 aa15.14■□□□□ 0.01
TARDBP-228ENST00000629725 RPP25LQ8N5L8 163 aaKnown RBP15.14■□□□□ 0.01
TARDBP-228ENST00000629725 PHB2Q99623 299 aa15.14■□□□□ 0.01
TARDBP-228ENST00000629725 OVOL2Q9BRP0 275 aa15.14■□□□□ 0.01
TARDBP-228ENST00000629725 IGLV2-23P01705 113 aa15.13■□□□□ 0.01
TARDBP-228ENST00000629725 PTX4Q96A99 478 aa15.13■□□□□ 0.01
TARDBP-228ENST00000629725 DERL3Q96Q80 235 aa15.13■□□□□ 0.01
TARDBP-228ENST00000629725 ZC4H2Q9NQZ6 224 aa15.13■□□□□ 0.01
TARDBP-228ENST00000629725 SLC35D1Q9NTN3 355 aa15.13■□□□□ 0.01
TARDBP-228ENST00000629725 CLEC2DQ9UHP7 191 aa15.13■□□□□ 0.01
TARDBP-228ENST00000629725 DIMT1Q9UNQ2 313 aaKnown RBP15.13■□□□□ 0.01
TARDBP-228ENST00000629725 IRGMA1A4Y4 181 aa15.12■□□□□ 0.01
TARDBP-228ENST00000629725 CRYGBP07316 175 aa15.12■□□□□ 0.01
TARDBP-228ENST00000629725 HTR2CP28335 458 aa15.12■□□□□ 0.01
TARDBP-228ENST00000629725 KIR2DS2P43631 304 aa15.12■□□□□ 0.01
TARDBP-228ENST00000629725 OR10K2Q6IF99 312 aa15.12■□□□□ 0.01
TARDBP-228ENST00000629725 SLC16A13Q7RTY0 426 aa15.12■□□□□ 0.01
TARDBP-228ENST00000629725 ADAD2Q8NCV1 583 aaKnown RBP15.12■□□□□ 0.01
TARDBP-228ENST00000629725 WDR89Q96FK6 387 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-228ENST00000629725 EXOSC1Q9Y3B2 195 aaKnown RBP15.12■□□□□ 0.01
TARDBP-228ENST00000629725 PNMA8CA0A1B0GUJ8 204 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 MSGN1A6NI15 193 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 UBBP0CG47 229 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 RPS27AP62979 156 aaKnown RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 HLA-DRB3P79483 266 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 EXOSC2Q13868 293 aaKnown RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 CEMP1Q6PRD7 247 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 KCTD12Q96CX2 325 aaKnown RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 HARBI1Q96MB7 349 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 GGTLC1Q9BX51 225 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 TMEM59Q9BXS4 323 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 RIMS4Q9H426 269 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 AKIP1Q9NQ31 210 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 PLEKHJ1Q9NW61 149 aa15.11■□□□□ 0.01
TARDBP-228ENST00000629725 TECRQ9NZ01 308 aaKnown RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 ZNF230Q9UIE0 474 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-228ENST00000629725 A0A0J9YWU9 116 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 C2orf70A6NJV1 201 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 FAM223BA6NKX1 122 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 M0R1X1 148 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 OR9G9P0C7N8 305 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 FOLR2P14207 255 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 RHOGP84095 191 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 FAM223AQ8IWN6 122 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 TMEM80Q96HE8 168 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 NICN1Q9BSH3 213 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 MGAT4AQ9UM21 535 aa15.1■□□□□ 0.01
TARDBP-228ENST00000629725 LOC102724200A0A096LPH7 203 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-228ENST00000629725 TRBV6-6A0A0A6YYG2 114 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 TUSC2O75896 110 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 SCTP09683 121 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 EDN2P20800 178 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 ATP5G2Q06055 141 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 CYGBQ8WWM9 190 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 THRSPQ92748 146 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 TM2D1Q9BX74 207 aa15.09■□□□□ 0.01
TARDBP-228ENST00000629725 KLK5Q9Y337 293 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-228ENST00000629725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.08■□□□□ 0
TARDBP-228ENST00000629725 SHOXO15266 292 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 MPPED1O15442 326 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 PRH1P02810 166 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 EWSR1Q01844 656 aaKnown RBP eCLIP15.08■□□□□ 0
TARDBP-228ENST00000629725 CBX3Q13185 183 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 MED21Q13503 144 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.08■□□□□ 0
TARDBP-228ENST00000629725 ZNF485Q8NCK3 441 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 KCNG3Q8TAE7 436 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 HDHD3Q9BSH5 251 aaPredicted RBP15.08■□□□□ 0
TARDBP-228ENST00000629725 AK3Q9UIJ7 227 aa15.08■□□□□ 0
TARDBP-228ENST00000629725 TRBV9A0A0B4J1U6 114 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 SRRM4A7MD48 611 aaKnown RBP15.07■□□□□ 0
TARDBP-228ENST00000629725 NDUFB8O95169 186 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 MAPK3P27361 379 aaPredicted RBP15.07■□□□□ 0
TARDBP-228ENST00000629725 TAS2R43P59537 309 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 TNFRSF9Q07011 255 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 TNXAQ16473 311 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 MRGPRG-AS1Q2M3A8 158 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 TTC23Q5W5X9 447 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 SETD9Q8NE22 299 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 RDH8Q9NYR8 311 aa15.07■□□□□ 0
TARDBP-228ENST00000629725 PPP5D1E7EU14 171 aa15.06■□□□□ 0
TARDBP-228ENST00000629725 EBAG9O00559 213 aa15.06■□□□□ 0
TARDBP-228ENST00000629725 DEDDO75618 318 aa15.06■□□□□ 0
TARDBP-228ENST00000629725 ZNF45Q02386 682 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms