RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 ABCA11PQ4W5N1 156 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 LPCAT3Q6P1A2 487 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 KCTD9Q7L273 389 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 FAM216AQ8WUB2 273 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 DDB2Q92466 427 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 AKR1E2Q96JD6 320 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 H0YJW9 148 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 RAMP3O60896 148 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 SLC22A5O76082 557 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 PTTG1O95997 202 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 SUPT4H1P63272 117 aaKnown RBP13.35□□□□□ -0.27
CCNA1-203ENST00000625767 SP6Q3SY56 376 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 C9orf139Q6ZV77 190 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 CMTM1Q8IZ96 169 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 CENPSQ8N2Z9 138 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 TCTEX1D2Q8WW35 142 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 RITA1Q96K30 269 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 TP53RKQ96S44 253 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 GHITMQ9H3K2 345 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 FAM96BQ9Y3D0 163 aa13.35□□□□□ -0.27
CCNA1-203ENST00000625767 MPPED1O15442 326 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 IGKV1-16P04430 117 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 HNF1AP20823 631 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 MSMO1Q15800 293 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 FAM71F2Q6NXP2 309 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 CCBE1Q6UXH8 406 aaPredicted RBP13.34□□□□□ -0.27
CCNA1-203ENST00000625767 OR52B4Q8NGK2 314 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 PIFOQ8TCI5 191 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 ZNF486Q96H40 463 aaPredicted RBP13.34□□□□□ -0.27
CCNA1-203ENST00000625767 MEGF9Q9H1U4 602 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 NUBP2Q9Y5Y2 271 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 CRYM-AS1A6NIL9 109 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 FBP1P09467 338 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 RND3P61587 244 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 PPP1R1AQ13522 171 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 SLC25A42Q86VD7 318 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 ZBTB34Q8NCN2 500 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 OR5AN1Q8NGI8 311 aa13.34□□□□□ -0.27
CCNA1-203ENST00000625767 HSD17B10Q99714 261 aaKnown RBP13.34□□□□□ -0.27
CCNA1-203ENST00000625767 FCGR3BO75015 233 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 PEX14O75381 377 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 F2RP25116 425 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 THBS3P49746 956 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 BPIFB3P59826 476 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 OXA1LQ15070 435 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 ZNF66Q6ZN08 573 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 SIGLECL1Q8N7X8 197 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 SCGB3A2Q96PL1 93 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 SSX3Q99909 188 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 NAA60Q9H7X0 242 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 CDC42EP3Q9UKI2 254 aa13.33□□□□□ -0.28
CCNA1-203ENST00000625767 PLXNB1O43157 2135 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 A0A0B4J293 547 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 TEX13DA0A0J9YY54 714 aaPredicted RBP13.32□□□□□ -0.28
CCNA1-203ENST00000625767 VENTXO95231 258 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 SNRNP70P08621 437 aaKnown RBP13.32□□□□□ -0.28
CCNA1-203ENST00000625767 OR5AC1P0C628 307 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 SRD5A1P18405 259 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 HABP2Q14520 560 aaPredicted RBP13.32□□□□□ -0.28
CCNA1-203ENST00000625767 HNF4GQ14541 408 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 SLC9A3R2Q15599 337 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 TUSC1Q2TAM9 212 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 ZNF585BQ52M93 769 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 SPAG16Q8N0X2 631 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 SEC22CQ9BRL7 303 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 MARVELD1Q9BSK0 173 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 TNFRSF19Q9NS68 423 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 SLC35D1Q9NTN3 355 aa13.32□□□□□ -0.28
CCNA1-203ENST00000625767 C3orf85A0A1B0GTC6 90 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 OOSP1A8MZH6 123 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 H7C2Y5 167 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 TXNL1O43396 289 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 IGKV1D-33P01593 117 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 IGKV1-33P01594 117 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 IGHV4-59P01825 116 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 OR4E1P0C645 316 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 VAMP1P23763 118 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 CNTFRP26992 372 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 DHODHQ02127 395 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 CCDC144NLQ6NUI1 221 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 CCDC71LQ8N9Z2 235 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 LHFPL5Q8TAF8 219 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 INMT-MINDY4F8WBC2 141 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 H3BUX3 64 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 CRYZL1O95825 349 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 IGKV1-39P01597 117 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 IGKV1D-39P04432 117 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 UBE2MP61081 183 aaKnown RBP13.31□□□□□ -0.28
CCNA1-203ENST00000625767 LY6EQ16553 131 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 TMEM219Q86XT9 240 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 CHPT1Q8WUD6 406 aa13.31□□□□□ -0.28
CCNA1-203ENST00000625767 FAM90A9PA6NNJ1 464 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 S1PR2O95136 353 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms