RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HMX3A6NHT5 357 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 SOCS1O15524 211 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 BPNT1O95861 308 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 ARSBP15848 533 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 RPL23AP62750 156 aaKnown RBP10.83□□□□□ -0.68
SCAF1-203ENST00000598359 TMEM30BQ3MIR4 351 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 C8orf86Q6ZUL3 223 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 OR2W3Q7Z3T1 314 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 OR52I2Q8NH67 350 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 FCAMRQ8WWV6 532 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 RITA1Q96K30 269 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 DUX3Q96PT4 197 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 TM2D1Q9BX74 207 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 PARP12Q9H0J9 701 aaKnown RBP10.83□□□□□ -0.68
SCAF1-203ENST00000598359 LPAR5Q9H1C0 372 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 JPT1Q9UK76 154 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 MRPS7Q9Y2R9 242 aaKnown RBP10.83□□□□□ -0.68
SCAF1-203ENST00000598359 NUBP2Q9Y5Y2 271 aa10.83□□□□□ -0.68
SCAF1-203ENST00000598359 NUDT19A8MXV4 375 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 SULT1C2O00338 296 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 TXNL1O43396 289 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 SCGNO76038 276 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 GSTT2BP0CG30 244 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 CNTFRP26992 372 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 HTD2P86397 168 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 CD300CQ08708 224 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 HMGN3Q15651 99 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 FOXRED2Q8IWF2 684 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 GALMQ96C23 342 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 RASL11BQ9BPW5 248 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 LIN7CQ9NUP9 197 aaKnown RBP10.82□□□□□ -0.68
SCAF1-203ENST00000598359 NECAP2Q9NVZ3 263 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 PLEKHJ1Q9NW61 149 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 MTFP1Q9UDX5 166 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 AK3Q9UIJ7 227 aa10.82□□□□□ -0.68
SCAF1-203ENST00000598359 SAA2-SAA4A0A096LPE2 208 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 C7orf66A4D0T2 115 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 AP4M1O00189 453 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 ST8SIA5O15466 376 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 YPEL1O60688 119 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 NAPSAO96009 420 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 RPLP1P05386 114 aaKnown RBP10.81□□□□□ -0.68
SCAF1-203ENST00000598359 SAA2P0DJI9 122 aaPredicted RBP10.81□□□□□ -0.68
SCAF1-203ENST00000598359 SLC35B1P78383 322 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 TATDN3Q17R31 274 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 MRPL41Q8IXM3 137 aaKnown RBP10.81□□□□□ -0.68
SCAF1-203ENST00000598359 FAM71E2Q8N5Q1 922 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 KLHL30-AS1Q8NEE0 82 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 OR6F1Q8NGZ6 308 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 YPEL2Q96QA6 119 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 NABP2Q9BQ15 211 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 SCPEP1Q9HB40 452 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 TAS2R8Q9NYW2 309 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 ZNF107Q9UII5 783 aaPredicted RBP10.81□□□□□ -0.68
SCAF1-203ENST00000598359 RAB22AQ9UL26 194 aa10.81□□□□□ -0.68
SCAF1-203ENST00000598359 TCRBP04435 133 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
SCAF1-203ENST00000598359 VEGFCP49767 419 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 TMEM50BP56557 158 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 KRTAP10-11P60412 298 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 MMDQ15546 238 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 RNASE12Q5GAN4 147 aaKnown RBP10.8□□□□□ -0.68
SCAF1-203ENST00000598359 ZNF880Q6PDB4 577 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 OR2AK2Q8NG84 335 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 GPX8Q8TED1 209 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 ARHGAP5-AS1Q96IT6 56 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 HRASLSQ9HDD0 168 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 ALG5Q9Y673 324 aa10.8□□□□□ -0.68
SCAF1-203ENST00000598359 FOXI3A8MTJ6 420 aaPredicted RBP10.79□□□□□ -0.68
SCAF1-203ENST00000598359 CCNKO75909 580 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 RGS11O94810 467 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 THBS3P49746 956 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 ACTBP60709 375 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 PNLIPRP3Q17RR3 467 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 TEX38Q6PEX7 206 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 GLDNQ6ZMI3 551 aaPredicted RBP10.79□□□□□ -0.68
SCAF1-203ENST00000598359 ZNF833PQ6ZTB9 187 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 REC114Q7Z4M0 266 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 FAM89BQ8N5H3 189 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 OR8H1Q8NGG4 311 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 RCC1LQ96I51 464 aaKnown RBP10.79□□□□□ -0.68
SCAF1-203ENST00000598359 ABHD14BQ96IU4 210 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 ST6GAL2Q96JF0 529 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 URM1Q9BTM9 101 aaKnown RBP10.79□□□□□ -0.68
SCAF1-203ENST00000598359 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 KLK11Q9UBX7 282 aa10.79□□□□□ -0.68
SCAF1-203ENST00000598359 TRAV18A0A075B6X5 111 aa10.78□□□□□ -0.68
SCAF1-203ENST00000598359 METTL21EPA6NDL7 271 aa10.78□□□□□ -0.68
SCAF1-203ENST00000598359 RAB27BO00194 218 aa10.78□□□□□ -0.68
SCAF1-203ENST00000598359 RBBP9O75884 186 aa10.78□□□□□ -0.68
SCAF1-203ENST00000598359 DHFRP00374 187 aa10.78□□□□□ -0.68
SCAF1-203ENST00000598359 SCTP09683 121 aa10.78□□□□□ -0.68
SCAF1-203ENST00000598359 PRSS3P35030 304 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms