RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 COMMD3Q9UBI1 195 aa13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 GAB2Q9UQC2 676 aa13.75□□□□□ -0.21
SHKBP1-203ENST00000594298 OR5H14A6NHG9 310 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 SSX5O60225 188 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 OR8U9P0C7N5 309 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 ZNF182P17025 639 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 TMEM69Q5SWH9 247 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 Q8N9W7 124 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 OR8U1Q8NH10 309 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 DUX3Q96PT4 197 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 ANXA10Q9UJ72 324 aa13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 LSM4Q9Y4Z0 139 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-203ENST00000594298 TENM3Q9P273 2699 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 IGKV1D-8A0A087WSZ0 117 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 NOL3O60936 208 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 RBBP9O75884 186 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 APOA1P02647 267 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 RPLP1P05386 114 aaKnown RBP13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 CT45A6P0DMU7 189 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 CT45A5P0DMU8 189 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 CT45A7P0DMV0 189 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 SOX6P35712 828 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 CDX1P47902 265 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 ARPC4P59998 168 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 FOXE3Q13461 319 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 CLVS1Q8IUQ0 354 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 H1FOOQ8IZA3 346 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 OR5M8Q8NGP6 311 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 RAB2BQ8WUD1 216 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 U3KQK5 164 aa13.73□□□□□ -0.21
SHKBP1-203ENST00000594298 SLC22A5O76082 557 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 ELANEP08246 267 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 TMBIM6P55061 237 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 RAB25P57735 213 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 ACTBP60709 375 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 TAGLNQ01995 201 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 MMDQ15546 238 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 CXorf66Q5JRM2 361 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 C9orf66Q5T8R8 295 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 BEST4Q8NFU0 473 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 OR5AN1Q8NGI8 311 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 RNF5Q99942 180 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 OR2D2Q9H210 308 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 PLSCR3Q9NRY6 295 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 KIAA1456Q9P272 454 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 WASHC3Q9Y3C0 194 aa13.72□□□□□ -0.21
SHKBP1-203ENST00000594298 H7C2Y5 167 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 M0R1X1 148 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 APOA2P02652 100 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 LUMP51884 338 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 TAS2R20P59543 309 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 CFHR3Q02985 330 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 FAM131AQ6UXB0 335 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 IFT46Q9NQC8 304 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 ZNF580Q9UK33 172 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 OR2W1Q9Y3N9 320 aa13.71□□□□□ -0.21
SHKBP1-203ENST00000594298 H0YJW9 148 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 NBR2O15453 112 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 IGHG4P01861 327 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 PRSS3P35030 304 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 F2RL1P55085 397 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 CBX3Q13185 183 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
SHKBP1-203ENST00000594298 FAM25AB3EWG3 89 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 FAM25CB3EWG5 89 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 FAM25GB3EWG6 89 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 PROP1O75360 226 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 EIF4EP06730 217 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 FHL3Q13643 280 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 GLDNQ6ZMI3 551 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 FAM71E2Q8N5Q1 922 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 GVQW1Q8N7I0 195 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 NPBQ8NG41 125 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 C4orf3Q8WVX3 66 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 ADTRPQ96IZ2 230 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 SDHAF2Q9NX18 166 aa13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 MRPS7Q9Y2R9 242 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-203ENST00000594298 HPGDSO60760 199 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 HLA-DQB1P01920 261 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 IGF1P05019 195 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 RRASP10301 218 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 NFYAP23511 347 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 PSMB8P28062 276 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 LIN54Q6MZP7 749 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 DRAXINQ8NBI3 349 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 OR5AP2Q8NGF4 316 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 C15orf40Q8WUR7 153 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 FLYWCH2Q96CP2 140 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 PRR25Q96S07 402 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
SHKBP1-203ENST00000594298 SEC14L6B5MCN3 397 aa13.67□□□□□ -0.22
SHKBP1-203ENST00000594298 PTHLHP12272 177 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms