RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 KPTNQ9Y664 436 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 TENM1Q9UKZ4 2725 aa8.5□□□□□ -1.05
TPM1-212ENST00000558347 CDIPTO14735 213 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 ST8SIA3O43173 380 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 DIRAS3O95661 229 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 WNT2P09544 360 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 CTXN2P0C2S0 81 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 RCC1P18754 421 aaPredicted RBP8.49□□□□□ -1.05
TPM1-212ENST00000558347 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
TPM1-212ENST00000558347 MPV17LQ2QL34 196 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 WDR82Q6UXN9 313 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.49□□□□□ -1.05
TPM1-212ENST00000558347 OR4D5Q8NGN0 318 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 GLYATL2Q8WU03 294 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 HES4Q9HCC6 221 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 A0A1B0GW64 132 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 A6NLC8 198 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 LRRC30A6NM36 301 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 FSTL3O95633 263 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 SCGB1D2O95969 90 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 PPYP01298 95 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 SFTA3P0C7M3 94 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 SPP1P10451 314 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 MMP9P14780 707 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 AADACP22760 399 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 ARHGDIBP52566 201 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 AKR1C2P52895 323 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 PAX2Q02962 417 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 AKR1C1Q04828 323 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 SCGB2A2Q13296 93 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 PEA15Q15121 130 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 LYPD2Q6UXB3 125 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 Q6ZRG5 221 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 FAM219AQ8IW50 185 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 FOXRED2Q8IWF2 684 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 C1orf87Q8N0U7 546 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 FAM58AQ8N1B3 248 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 LFNGQ8NES3 379 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 ZNF418Q8TF45 676 aaPredicted RBP8.49□□□□□ -1.05
TPM1-212ENST00000558347 C22orf15Q8WYQ4 148 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 TMEM56Q96MV1 263 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 RIMS4Q9H426 269 aaPredicted RBP8.49□□□□□ -1.05
TPM1-212ENST00000558347 IFT22Q9H7X7 185 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 INSIG2Q9Y5U4 225 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 TMEM56-RWDD3S4R434 201 aa8.49□□□□□ -1.05
TPM1-212ENST00000558347 TRBV6-6A0A0A6YYG2 114 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 KIR2DS1A0A191URI9 304 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 TRDCB7Z8K6 153 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 MPPED1O15442 326 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 NAPSAO96009 420 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 FOLR2P14207 255 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 IRF2P14316 349 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 PRKACAP17612 351 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 KIR2DS4P43632 304 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 NPBWR1P48145 328 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 FXYD4P59646 89 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 HILS1P60008 231 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 GNMTQ14749 295 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 KIR2DS1Q14954 304 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 ZNF146Q15072 292 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 PHLDA2Q53GA4 152 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
TPM1-212ENST00000558347 SPIN3Q5JUX0 258 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 ZNF826PQ6ZT77 177 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 LYZL2Q7Z4W2 148 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 FAM90A1Q86YD7 464 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 DMBX1Q8NFW5 382 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 OR11L1Q8NGX0 322 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 IL22RA2Q969J5 263 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 NEIL1Q96FI4 390 aaPredicted RBP8.48□□□□□ -1.05
TPM1-212ENST00000558347 KIRREL1Q96J84 757 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 ZNF488Q96MN9 340 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 SSBP3Q9BWW4 388 aaPredicted RBP8.48□□□□□ -1.05
TPM1-212ENST00000558347 TMEM222Q9H0R3 208 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 SMDT1Q9H4I9 107 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 C11orf1Q9H5F2 150 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 SEBOXQ9HB31 216 aaPredicted RBP8.48□□□□□ -1.05
TPM1-212ENST00000558347 SPACA1Q9HBV2 294 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 Q9N2K0 584 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 SMCO4Q9NRQ5 59 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 ZNF581Q9P0T4 197 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 MIOXQ9UGB7 285 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 MLXQ9UH92 298 aa8.48□□□□□ -1.05
TPM1-212ENST00000558347 C3orf85A0A1B0GTC6 90 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 SRRM5B3KS81 715 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 OR7C1O76099 320 aaPredicted RBP8.47□□□□□ -1.05
TPM1-212ENST00000558347 NXPH2O95156 264 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 TSPAN15O95858 294 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 LHBP01229 141 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 TK1P04183 234 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 LMO1P25800 156 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 CD80P33681 288 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 SNCAP37840 140 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 KCNJ3P48549 501 aa8.47□□□□□ -1.05
TPM1-212ENST00000558347 HOXA1P49639 335 aaPredicted RBP8.47□□□□□ -1.05
TPM1-212ENST00000558347 GNB2P62879 340 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms