RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CUL7Q14999 1698 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 PBRM1Q86U86 1689 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 A0A0A6YYH2 397 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 TRGV4A0A0C4DH28 118 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 A6NJ64 397 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 M0R381 172 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 IL6P05231 212 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 COX5BP10606 129 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 CRHBPP24387 322 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 TAS2R45P59539 299 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 COTL1Q14019 142 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 GNA13Q14344 377 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 SS18Q15532 418 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 ZNF767PQ75MW2 155 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 DHRS9Q9BPW9 319 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 MND1Q9BWT6 205 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 PRG4Q92954 1404 aaPredicted RBP2.13□□□□□ -2.07
SYNE2-210ENST00000553455 ADAMTS12P58397 1594 aa2.13□□□□□ -2.07
SYNE2-210ENST00000553455 ADGRB3O60242 1522 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 PTPRGP23470 1445 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 KNCNA6PVL3 124 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 SLC17A3O00476 420 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 GSTZ1O43708 216 aaPredicted RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 HLA-DRAP01903 254 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 CD200P41217 278 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 SERPINB10P48595 397 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 CXCR4P61073 352 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 RPS24P62847 133 aaKnown RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 JOSD1Q15040 202 aaPredicted RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 EBPQ15125 230 aaKnown RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 SLC36A2Q495M3 483 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 LGALS9CQ6DKI2 356 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 Q8NDZ9 215 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 OR2D3Q8NGH3 330 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 TMBIM1Q969X1 311 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 CPNE2Q96FN4 548 aaPredicted RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 ZNHIT6Q9NWK9 470 aaKnown RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 EMC3Q9P0I2 261 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 PCYT1BQ9Y5K3 369 aaPredicted RBP2.12□□□□□ -2.07
SYNE2-210ENST00000553455 CHD5Q8TDI0 1954 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 SLIT2O94813 1529 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 DISP1Q96F81 1524 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 KDM5BQ9UGL1 1544 aa2.12□□□□□ -2.07
SYNE2-210ENST00000553455 DHX57Q6P158 1386 aaKnown RBP2.11□□□□□ -2.07
SYNE2-210ENST00000553455 MUC21A0A0G2JKD1 596 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 MUC21A0A140T8X8 626 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 TRAPPC3O43617 180 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 PSMG1O95456 288 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 C8orf88P0DMB2 117 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 GZMBP10144 247 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 PSMD8P48556 350 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 HLA-DRB3P79483 266 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 MLLT11Q13015 90 aaPredicted RBP2.11□□□□□ -2.07
SYNE2-210ENST00000553455 HES1Q14469 280 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 TMEM31Q5JXX7 168 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 Q8N402 240 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 ZNF471Q9BX82 626 aaPredicted RBP2.11□□□□□ -2.07
SYNE2-210ENST00000553455 DRC3Q9H069 523 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 SLC2A9Q9NRM0 540 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 CACNA1GO43497 2377 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 THSD7AQ9UPZ6 1657 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 ICE1Q9Y2F5 2266 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 MAPKBP1O60336 1514 aa2.11□□□□□ -2.07
SYNE2-210ENST00000553455 UACAQ9BZF9 1416 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 ADAMTS7Q9UKP4 1686 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 GOLGA3Q08378 1498 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 ABCC10Q5T3U5 1492 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 PLB1Q6P1J6 1458 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 TMED7-TICAM2A0A0A6YYA0 188 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 IGHV3-15A0A0B4J1V0 119 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 MDFIC2A0A1B0GVS7 189 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 OR5K4A6NMS3 321 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 H3BPC8 53 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 TYMSP04818 313 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 CD36P16671 472 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 TMEM33P57088 247 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 PPP1R1AQ13522 171 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 CST9Q5W186 159 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 AMTNQ6UX39 209 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 C2orf91Q6ZV80 131 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 NAA40Q86UY6 237 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 BAP18Q8IXM2 172 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 LRRC34Q8IZ02 419 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 HAVCR2Q8TDQ0 301 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 DDI1Q8WTU0 396 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 EEF1AKMT1Q8WVE0 214 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.1□□□□□ -2.07
SYNE2-210ENST00000553455 RNASE6Q93091 150 aaKnown RBP2.1□□□□□ -2.07
SYNE2-210ENST00000553455 MS4A6EQ96DS6 147 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 GLI2P10070 1586 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 ERCC6L2Q5T890 1561 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
SYNE2-210ENST00000553455 ABCC2Q92887 1545 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 GRIFINA4D1Z8 144 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 C5orf49A4QMS7 147 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 OR11H12B2RN74 326 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 MT-CO2P00403 227 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 P0DMU3 169 aa2.09□□□□□ -2.07
SYNE2-210ENST00000553455 FAM231AP0DMU4 169 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms