RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 TMPRSS5Q9H3S3 457 aa13.29□□□□□ -0.28
ATP2C1-224ENST00000533801 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-224ENST00000533801 GFOD1Q9NXC2 390 aa13.29□□□□□ -0.28
ATP2C1-224ENST00000533801 CARHSP1Q9Y2V2 147 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-224ENST00000533801 DSCAMO60469 2012 aa13.29□□□□□ -0.28
ATP2C1-224ENST00000533801 SLC31A2O15432 143 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 CRYABP02511 175 aaKnown RBP13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 TLE4Q04727 773 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 DTD1Q8TEA8 209 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 CGAP01215 116 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 IRF2P14316 349 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 TAGLN2P37802 199 aaKnown RBP13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 REG1BP48304 166 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 R3HDM4Q96D70 268 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
ATP2C1-224ENST00000533801 TAS2R30P59541 319 aa13.27□□□□□ -0.28
ATP2C1-224ENST00000533801 GUSBP1Q15486 140 aa13.27□□□□□ -0.28
ATP2C1-224ENST00000533801 AVPI1Q5T686 147 aa13.27□□□□□ -0.28
ATP2C1-224ENST00000533801 SLC35E4Q6ICL7 350 aa13.27□□□□□ -0.28
ATP2C1-224ENST00000533801 TRBV6-6A0A0A6YYG2 114 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 MARCH11A6NNE9 402 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 FGF7P21781 194 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 HCFC1P51610 2035 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 Q6ZS92 163 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 HAPLN4Q86UW8 402 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 PPP1R35Q8TAP8 253 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 QTRT1Q9BXR0 403 aaKnown RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 TRGV8A0A0C4DH27 118 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 MBD3L4A6NDZ8 208 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 MBD3L3A6NE82 208 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 MBD3L5A6NJ08 208 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 MYOD1P15172 320 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 RAB5CP51148 216 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 KIAA0141Q14154 515 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 C1orf162Q8NEQ5 155 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 OR4A16Q8NH70 328 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 MBD3L2Q8NHZ7 208 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
ATP2C1-224ENST00000533801 J3QW42 95 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 IFNA4P05014 189 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 TIMM23BQ5SRD1 257 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 LHX4Q969G2 390 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 KITLGP21583 273 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 TFF3Q07654 80 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 SRSF7Q16629 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 ZNF709Q8N972 641 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 TRAV3A0A0B4J244 114 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 ZNF343Q6P1L6 599 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 RPUSD4Q96CM3 377 aaKnown RBP13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 POM121Q96HA1 1249 aa13.26□□□□□ -0.29
ATP2C1-224ENST00000533801 DUXBA0A1W2PPF3 345 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 UBE2G2P60604 165 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 HFEQ30201 348 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 OR10P1Q8NGE3 313 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 TMEM204Q9BSN7 226 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 AURKAIP1Q9NWT8 199 aaPredicted RBP13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 IGLV1-44P01699 117 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 TUBG1P23258 451 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 CD40P25942 277 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 ZNF134P52741 427 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 ERVK-16P61578 105 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 NKX6-1P78426 367 aaPredicted RBP13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 SSX7Q7RTT5 188 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 ZNF525Q8N782 197 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 IL22RA2Q969J5 263 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 PTPRBP23467 1997 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 MDKP21741 143 aaPredicted RBP13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 ZNF429Q86V71 674 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 NEUROG1Q92886 237 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 LRFN3Q9BTN0 628 aa13.25□□□□□ -0.29
ATP2C1-224ENST00000533801 A0A0G2JNJ9 132 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 H3BQ15 152 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 COL8A2P25067 703 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 SNRPEP62304 92 aaKnown RBP13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 FAM90A1Q86YD7 464 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 DOLPP1Q86YN1 238 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 ABHD12Q8N2K0 398 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 NECAP1Q8NC96 275 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 S1PR3Q99500 378 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 CALYQ9NYX4 217 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 Q9UFV3 132 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 MAP1LC3B2A6NCE7 125 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 OR2C1O95371 312 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 OR9G9P0C7N8 305 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 GLRXP35754 106 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 HOXA1P49639 335 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 DLX1P56177 255 aa13.24□□□□□ -0.29
ATP2C1-224ENST00000533801 MAP1LC3BQ9GZQ8 125 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms