RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 TMPRSS2O15393 492 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 RUNX1Q01196 453 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 SPANXN5Q5MJ07 72 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 NCMAPQ5T1S8 102 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 TSNAXQ99598 290 aaKnown RBP13.85□□□□□ -0.19
TOM1-216ENST00000492723 IFI27L2Q9H2X8 130 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 RAB9BQ9NP90 201 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.85□□□□□ -0.19
TOM1-216ENST00000492723 LAMP3Q9UQV4 416 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 PKDREJQ9NTG1 2253 aa13.85□□□□□ -0.19
TOM1-216ENST00000492723 RNASEK-C17orf49H0YIS7 233 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 SLC31A2O15432 143 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 FCGR3BO75015 233 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 DFFBO76075 338 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 DMRTC2Q8IXT2 367 aaPredicted RBP13.84□□□□□ -0.19
TOM1-216ENST00000492723 CD300LFQ8TDQ1 290 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 HSPB7Q9UBY9 170 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 ATRXP46100 2492 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 A0A1W2PPE3 182 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 E7EQL1 145 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 CCL21O00585 134 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 RBMXL2O75526 392 aaKnown RBP13.84□□□□□ -0.19
TOM1-216ENST00000492723 NFYBP25208 207 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 TAS2R30P59541 319 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 SLC25A24Q6NUK1 477 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 TCF23Q7RTU1 214 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 FAM216AQ8WUB2 273 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 GNPNAT1Q96EK6 184 aaPredicted RBP13.84□□□□□ -0.19
TOM1-216ENST00000492723 GFOD1Q9NXC2 390 aa13.84□□□□□ -0.19
TOM1-216ENST00000492723 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 MARCH11A6NNE9 402 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 TRIM77I1YAP6 450 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 RAB29O14966 203 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 NDUFB7P17568 137 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 CCL17Q92583 94 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 RNASE6Q93091 150 aaKnown RBP13.83□□□□□ -0.19
TOM1-216ENST00000492723 ABHD14AQ9BUJ0 271 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 DYNLRB1Q9NP97 96 aa13.83□□□□□ -0.19
TOM1-216ENST00000492723 TRAV38-1A0A0B4J264 116 aa13.83□□□□□ -0.2
TOM1-216ENST00000492723 IFNA5P01569 189 aa13.83□□□□□ -0.2
TOM1-216ENST00000492723 ARL16Q0P5N6 197 aa13.83□□□□□ -0.2
TOM1-216ENST00000492723 R3HDM4Q96D70 268 aa13.83□□□□□ -0.2
TOM1-216ENST00000492723 CHD8Q9HCK8 2581 aa13.83□□□□□ -0.2
TOM1-216ENST00000492723 DSCAML1Q8TD84 2053 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 A0A1B0GV50 99 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 GUCA2BQ16661 112 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 ST6GALNAC3Q8NDV1 305 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 LINC01560Q8TB33 94 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.82□□□□□ -0.2
TOM1-216ENST00000492723 UMAD1C9J7I0 102 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 CD5P06127 495 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 SNCAP37840 140 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 RAB7AP51149 207 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 HBG1P69891 147 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 HBG2P69892 147 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 TAGLNQ01995 201 aaKnown RBP13.82□□□□□ -0.2
TOM1-216ENST00000492723 CT45A1Q5HYN5 189 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 HAPLN4Q86UW8 402 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 IQCF2Q8IXL9 164 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 C1orf87Q8N0U7 546 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 CT45A3Q8NHU0 189 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 NKX6-2Q9C056 277 aaPredicted RBP13.82□□□□□ -0.2
TOM1-216ENST00000492723 TANC2Q9HCD6 1990 aa13.82□□□□□ -0.2
TOM1-216ENST00000492723 TMEM178BH3BS89 294 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 NUPL2O15504 423 aaKnown RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 CD3EP07766 207 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 DVL1P1P54792 670 aaPredicted RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 THNSL2Q86YJ6 484 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 SVBPQ8N300 66 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 LILRB2Q8N423 598 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 RELNP78509 3460 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 PPIAL4EA0A075B759 164 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 ZNF729A6NN14 1252 aaPredicted RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 PPIAL4DF5H284 164 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 SFTA3P0C7M3 94 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 PPIAL4FP0DN26 164 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 GRNP28799 593 aaKnown RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 CHRNB4P30926 498 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 C10orf91Q5T1B1 145 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 C1orf229Q6ZS94 237 aaPredicted RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 KDF1Q8NAX2 398 aaPredicted RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 SEC11CQ9BY50 192 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 IDI2-AS1Q9NZ38 188 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 SLC25A10Q9UBX3 287 aaPredicted RBP13.81□□□□□ -0.2
TOM1-216ENST00000492723 NDRG3Q9UGV2 375 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 FBXO7Q9Y3I1 522 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 PPIAL4AQ9Y536 164 aa13.81□□□□□ -0.2
TOM1-216ENST00000492723 C9JQL5 133 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 HPRT1P00492 218 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 SSX9Q7RTT3 188 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 COMMD1Q8N668 190 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 ZNF525Q8N782 197 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 SCGB1C1Q8TD33 95 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 S1PR3Q99500 378 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 TMEM106BQ9NUM4 274 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
TOM1-216ENST00000492723 PRELID3BQ9Y3B1 194 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 NBASA2RRP1 2371 aa13.8□□□□□ -0.2
TOM1-216ENST00000492723 SAA2-SAA4A0A096LPE2 208 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms