RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 H0YJW9 148 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 UPK1BO75841 260 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 IFNA2P01563 188 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 APOA2P02652 100 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 GNRHRP30968 328 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 DUTP33316 252 aaKnown RBP10.61□□□□□ -0.71
HDAC1-208ENST00000482310 THBS3P49746 956 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 RPL30P62888 115 aaKnown RBP10.61□□□□□ -0.71
HDAC1-208ENST00000482310 ABCA11PQ4W5N1 156 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-208ENST00000482310 LHFPL1Q86WI0 220 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 SLC38A6Q8IZM9 456 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 BVESQ8NE79 360 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 TERB2Q8NHR7 220 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 GHITMQ9H3K2 345 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 SLC35D1Q9NTN3 355 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 TCF19Q9Y242 345 aa10.61□□□□□ -0.71
HDAC1-208ENST00000482310 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 CENPXA8MT69 81 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 GPR31O00270 319 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 CHST1O43916 411 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 FCGR3BO75015 233 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 SLC22A5O76082 557 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 CNTFRP26992 372 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 UBA52P62987 128 aaKnown RBP10.6□□□□□ -0.71
HDAC1-208ENST00000482310 IFITM3Q01628 133 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 C16orf87Q6PH81 154 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 OR5R1Q8NH85 324 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 JMJD8Q96S16 334 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 SLC25A33Q9BSK2 321 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 RSRP1Q9BUV0 290 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 PRDM13Q9H4Q3 707 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 C14orf166Q9Y224 244 aaKnown RBP10.6□□□□□ -0.71
HDAC1-208ENST00000482310 VSIG4Q9Y279 399 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 WASHC3Q9Y3C0 194 aa10.6□□□□□ -0.71
HDAC1-208ENST00000482310 A6NDX4 124 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 SH2D7A6NKC9 451 aaPredicted RBP10.59□□□□□ -0.71
HDAC1-208ENST00000482310 NCBP2LA6PVI3 153 aaKnown RBP10.59□□□□□ -0.71
HDAC1-208ENST00000482310 PLA2G10O15496 165 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 LYRM1O43325 122 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 GPR137BO60478 399 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 CRYZL1O95825 349 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 MOSP00540 346 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 FAM106CPP0CH98 169 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 CD1BP29016 333 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 PIGPP57054 158 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 RTL8BQ17RB0 113 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 TUSC1Q2TAM9 212 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 TBC1D26Q86UD7 250 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 CMTM1Q8IZ96 169 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 OR2T10Q8NGZ9 312 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 FAM216AQ8WUB2 273 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 EAF1Q96JC9 268 aaPredicted RBP10.59□□□□□ -0.71
HDAC1-208ENST00000482310 RITA1Q96K30 269 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 HSD17B10Q99714 261 aaKnown RBP10.59□□□□□ -0.71
HDAC1-208ENST00000482310 SLC2A9Q9NRM0 540 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 SLC2A8Q9NY64 477 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 TBC1D24Q9ULP9 559 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 GAB2Q9UQC2 676 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 POMT1Q9Y6A1 747 aa10.59□□□□□ -0.71
HDAC1-208ENST00000482310 ATRQ13535 2644 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 NAP1L6A6NFF2 107 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 PGLYRP1O75594 196 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 IGKV1-16P04430 117 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 S100GP29377 79 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 BTCP35070 178 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 DYNLT3P51808 116 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 UCP3P55916 312 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 RPS16P62249 146 aaKnown RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 CATR1Q13166 79 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 CBX3Q13185 183 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 HABP2Q14520 560 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 AANATQ16613 207 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 DHRS7BQ6IAN0 325 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 LPCAT3Q6P1A2 487 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 ZNF66Q6ZN08 573 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 ADAD2Q8NCV1 583 aaKnown RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 ZFAND1Q8TCF1 268 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 ADTRPQ96IZ2 230 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 AKR1E2Q96JD6 320 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 COPZ2Q9P299 210 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 PRELID3BQ9Y3B1 194 aa10.58□□□□□ -0.72
HDAC1-208ENST00000482310 TET2Q6N021 2002 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-208ENST00000482310 FAM90A9PA6NNJ1 464 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 TRIM77I1YAP6 450 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 SHOXO15266 292 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 RAMP3O60896 148 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 CTSDP07339 412 aaPredicted RBP10.57□□□□□ -0.72
HDAC1-208ENST00000482310 RPA2P15927 270 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 ECI1P42126 302 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 F2RL1P55085 397 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 MMDQ15546 238 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 C9orf152Q5JTZ5 239 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 PDPNQ86YL7 162 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 SPAG16Q8N0X2 631 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
HDAC1-208ENST00000482310 ZBTB34Q8NCN2 500 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms