RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 FGF12P61328 243 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 SPINK9Q5DT21 86 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 WIPI2Q9Y4P8 454 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 SLC17A3O00476 420 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 CBR3O75828 277 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 TIAF1O95411 115 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 SPATA45Q537H7 98 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 OR1L6Q8NGR2 347 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 TXN2Q99757 166 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 NPCDR1Q9BY65 106 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 F6UZH7 168 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 SYNGR1O43759 233 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 ZFAND5O76080 213 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 CCL2P13500 99 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 CDC34P49427 236 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-207ENST00000470763 ZNF90Q03938 601 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 TIPARPQ7Z3E1 657 aaKnown RBP11.61□□□□□ -0.55
NPHP4-207ENST00000470763 FADS6Q8N9I5 356 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 PSMF1Q92530 271 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-207ENST00000470763 A0A0J9YW62 118 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 CEACAM8P31997 349 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-207ENST00000470763 CARD18P57730 90 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 YPEL3P61236 119 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-207ENST00000470763 CPEB3Q8NE35 698 aaKnown RBP11.61□□□□□ -0.55
NPHP4-207ENST00000470763 OR2H1Q9GZK4 316 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 MMP17Q9ULZ9 603 aa11.61□□□□□ -0.55
NPHP4-207ENST00000470763 TRAPPC2LH3BP13 241 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 IGHV3-9P01782 118 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 CELA2AP08217 269 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 CD99P14209 185 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 SLC23A3Q6PIS1 610 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 Q6ZN92 141 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 PLXDC1Q8IUK5 500 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 FGFRL1Q8N441 504 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 DOCK7Q96N67 2140 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 TECTBQ96PL2 329 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 DEFB126Q9BYW3 111 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 CHCHD2Q9Y6H1 151 aaPredicted RBP11.6□□□□□ -0.55
NPHP4-207ENST00000470763 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 KRASP01116 189 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 IER3P46695 156 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 SELENOTP62341 195 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 TRIM61Q5EBN2 209 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 KMT5CQ86Y97 462 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 TMEM147Q9BVK8 224 aa11.6□□□□□ -0.55
NPHP4-207ENST00000470763 SIRPB1O00241 398 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FCN1O00602 326 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 VAMP5O95183 116 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SRSF7Q16629 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
NPHP4-207ENST00000470763 RNF151Q2KHN1 245 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 CEACAM16Q2WEN9 425 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SAPCD1Q5SSQ6 148 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SPEM1Q8N4L4 309 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SIGLECL1Q8N7X8 197 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 CADM4Q8NFZ8 388 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A10PA6NDY2 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A18PA6NE21 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A16PA6NEW6 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A20PA6NIJ5 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A8PA6NJQ4 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A7PA6NKC0 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A22PA8MWA6 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A12PA8MX19 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A5PA8MXJ8 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A23PA8MXZ1 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 K7ESF4 209 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 TMPRSS2O15393 492 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SERPINA7P05543 415 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A15PP0C7V4 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A13PP0C7W8 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A14PP0C7W9 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FAM90A24PP0C7X0 464 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
NPHP4-207ENST00000470763 UNQ5815/PRO19632Q6UWF5 114 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 C17orf82Q86X59 251 aaPredicted RBP11.59□□□□□ -0.55
NPHP4-207ENST00000470763 FOXB1Q99853 325 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 C10orf142B7Z368 130 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 DUX1O43812 170 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 SPINK4O60575 86 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 ZG16O60844 167 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 G6PCP35575 357 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 IGFBP7Q16270 282 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 OR10P1Q8NGE3 313 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 STARD4Q96DR4 205 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 LAMTOR2Q9Y2Q5 125 aa11.59□□□□□ -0.55
NPHP4-207ENST00000470763 GTF3C1Q12789 2109 aa11.58□□□□□ -0.56
NPHP4-207ENST00000470763 PDE6DO43924 150 aa11.58□□□□□ -0.56
NPHP4-207ENST00000470763 PMCHP20382 165 aa11.58□□□□□ -0.56
NPHP4-207ENST00000470763 CXCL12P48061 93 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms