RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 CD33P20138 364 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 MRPL41Q8IXM3 137 aaKnown RBP12.09□□□□□ -0.47
MSH5-206ENST00000423982 NEU1Q99519 415 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 PRDM14Q9GZV8 571 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 ATRXP46100 2492 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 TLN1Q9Y490 2541 aaKnown RBP12.08□□□□□ -0.47
MSH5-206ENST00000423982 CLDN1O95832 211 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 CTXN2P0C2S0 81 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 SPCS3P61009 180 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 HBG1P69891 147 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 HBG2P69892 147 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 SERF2P84101 59 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 SLC10A1Q14973 349 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 OR5B12Q96R08 314 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 CACNA1AO00555 2505 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 GJE1A6NN92 205 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 IFNA1P01562 189 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.485e-6■■■□□ 17.5
MSH5-206ENST00000423982 FIP1L1Q6UN15 594 aaKnown RBP12.08□□□□□ -0.48
MSH5-206ENST00000423982 TECTBQ96PL2 329 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 SNHG12Q9BXW3 62 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 CLN8Q9UBY8 286 aa12.08□□□□□ -0.48
MSH5-206ENST00000423982 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
MSH5-206ENST00000423982 PGPEP1LA6NFU8 196 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 NUPR1O60356 82 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 RAMP3O60896 148 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 NPPCP23582 126 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
MSH5-206ENST00000423982 PAX5Q02548 391 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 TFF3Q07654 80 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 TMEM170AQ8WVE7 144 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
MSH5-206ENST00000423982 RNF150Q9ULK6 438 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 SIRPB1O00241 398 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 PAGE4O60829 102 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 HRASP01112 189 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 CRYAAP02489 173 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 GYPAP02724 150 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 S100GP29377 79 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
MSH5-206ENST00000423982 PLGLB1Q02325 96 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 COA6Q5JTJ3 125 aaKnown RBP12.07□□□□□ -0.48
MSH5-206ENST00000423982 SPACA3Q8IXA5 215 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 TMEM256Q8N2U0 113 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 OR2M7Q8NG81 312 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 NOL4LQ96MY1 436 aaPredicted RBP12.07□□□□□ -0.48
MSH5-206ENST00000423982 OR51I2Q9H344 312 aa12.07□□□□□ -0.48
MSH5-206ENST00000423982 WNT5AP41221 380 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 MAGEA5P43359 124 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 ACTL10Q5JWF8 245 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 MSRB2Q9Y3D2 182 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 KRASP01116 189 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 SLC25A6P12236 298 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 COL8A2P25067 703 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 SRD5A2P31213 254 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 PSMB3P49720 205 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 OR2T10Q8NGZ9 312 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 RAXQ9Y2V3 346 aa12.06□□□□□ -0.48
MSH5-206ENST00000423982 CEACAM6P40199 344 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 RIPPLY2Q5TAB7 128 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 FAM58AQ8N1B3 248 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 OR10G9Q8NGN4 311 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 OR10G7Q8NGN6 311 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 LSM10Q969L4 123 aaKnown RBP12.05□□□□□ -0.48
MSH5-206ENST00000423982 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 PINX1Q96BK5 328 aaKnown RBP12.05□□□□□ -0.48
MSH5-206ENST00000423982 K7EM74 188 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 MRPL33O75394 65 aaKnown RBP12.05□□□□□ -0.48
MSH5-206ENST00000423982 SCGB1D1O95968 90 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 GCGP01275 180 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 SP1P08047 785 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 SELEP16581 610 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 G6PCP35575 357 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 MEOX1P50221 254 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 LINC00205P59089 165 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 UBE2G2P60604 165 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 FAM78BQ5VT40 261 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
MSH5-206ENST00000423982 CA6P23280 308 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 PDLIM4P50479 330 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
MSH5-206ENST00000423982 ZNF766Q5HY98 468 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 CENPVQ7Z7K6 275 aaPredicted RBP12.04□□□□□ -0.48
MSH5-206ENST00000423982 TGIF2LYQ8IUE0 185 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
MSH5-206ENST00000423982 TTTY12Q9BZ98 90 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms