RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CAPGP40121 348 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 PJVKQ0ZLH3 352 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 YIF1BQ5BJH7 314 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 DRAXINQ8NBI3 349 aaPredicted RBP7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 APH1BQ8WW43 257 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 SNAPC3Q92966 411 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 FAM46BQ96A09 425 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 TMEM68Q96MH6 324 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 OVOL2Q9BRP0 275 aa7.67□□□□□ -1.18
TNFAIP3-202ENST00000420009 A0A0B4J203 849 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 BMPR1BO00238 502 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 IGLV2-23P01705 113 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 CRYGBP07316 175 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 LINC00205P59089 165 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 RPS16P62249 146 aaKnown RBP7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 PMS2P11Q13670 270 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 DEFB114Q30KQ6 69 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 TMPRSS11AQ6ZMR5 421 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 MOB1BQ7L9L4 216 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 C6orf201Q7Z4U5 140 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 CBR4Q8N4T8 237 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 NKAIN3Q8N8D7 197 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 ADAD2Q8NCV1 583 aaKnown RBP7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 PTX4Q96A99 478 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 SLC29A1Q99808 456 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 UQCC2Q9BRT2 126 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 FAAP24Q9BTP7 215 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 C11orf54Q9H0W9 315 aaPredicted RBP7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 BABAM2Q9NXR7 383 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 OR1A1Q9P1Q5 309 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 GHRLQ9UBU3 117 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 DNAH6Q9C0G6 4158 aa7.66□□□□□ -1.18
TNFAIP3-202ENST00000420009 TRBV6-6A0A0A6YYG2 114 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 A0A1W2PPK0 400 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 WBP4O75554 376 aaKnown RBP7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 APOA2P02652 100 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 DCKP27707 260 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 LGALS7P47929 136 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 EWSR1Q01844 656 aaKnown RBP eCLIP7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 SMN1Q16637 294 aaKnown RBP7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 MRGPRG-AS1Q2M3A8 158 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 ZNF485Q8NCK3 441 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 DYNLRB2Q8TF09 96 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 NEDD4LQ96PU5 975 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 DERL3Q96Q80 235 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 COA4Q9NYJ1 87 aa7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 ZNF230Q9UIE0 474 aaPredicted RBP7.65□□□□□ -1.18
TNFAIP3-202ENST00000420009 C2orf70A6NJV1 201 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 FAM223BA6NKX1 122 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 OR9G9P0C7N8 305 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 FOLR2P14207 255 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 EDN2P20800 178 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 ZBTB25P24278 435 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 HTR2CP28335 458 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 KIR2DS2P43631 304 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 RPS27AP62979 156 aaKnown RBP7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 HLA-DRB3P79483 266 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 EXOSC2Q13868 293 aaKnown RBP7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 OR10K2Q6IF99 312 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 FAM223AQ8IWN6 122 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 ZFP41Q8N8Y5 198 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 PYDC1Q8WXC3 89 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 WDR89Q96FK6 387 aaPredicted RBP7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 GGTLC1Q9BX51 225 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 TM2D1Q9BX74 207 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 AKIP1Q9NQ31 210 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 SLC35D1Q9NTN3 355 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 CLEC2DQ9UHP7 191 aa7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 DIMT1Q9UNQ2 313 aaKnown RBP7.64□□□□□ -1.19
TNFAIP3-202ENST00000420009 FAT2Q9NYQ8 4349 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 TRBV9A0A0B4J1U6 114 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 A0A0J9YWU9 116 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 LOC100130705A0A1B0GUX0 176 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 M0R1X1 148 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 DEDDO75618 318 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 UBBP0CG47 229 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 APELAP0DMC3 54 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 ATF4P18848 351 aaPredicted RBP7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 CEACAM6P40199 344 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 RHOGP84095 191 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 ZNF45Q02386 682 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 TNFRSF9Q07011 255 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 UNC119Q13432 240 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 SLC16A13Q7RTY0 426 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 KCNG3Q8TAE7 436 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 SETD6Q8TBK2 473 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 HARBI1Q96MB7 349 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 NICN1Q9BSH3 213 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 TMEM59Q9BXS4 323 aa7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 CHMP1AQ9HD42 196 aaPredicted RBP7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 TECRQ9NZ01 308 aaKnown RBP7.63□□□□□ -1.19
TNFAIP3-202ENST00000420009 ZNF221Q9UK13 617 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms