RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ZNF732B4DXR9 585 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 SPINT2O43291 252 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 ADH4P08319 380 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 CT45A10P0DMU9 189 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 SMIM10L1P0DMW3 83 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 GPR3P46089 330 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 CXCL12P48061 93 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 GNB2P62879 340 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 PAX2Q02962 417 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 SRYQ05066 204 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 MYBPHQ13203 477 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 UNC119Q13432 240 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 PRICKLE4Q2TBC4 344 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 ACSF3Q4G176 576 aaPredicted RBP5.05□□□□□ -1.6
HDAC9-203ENST00000406072 Q6ZS52 159 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 Q6ZVH6 145 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 ARL17AQ8IVW1 177 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 TMEM230Q96A57 120 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 SMIM10Q96HG1 83 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 TMEM140Q9NV12 185 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 PILRAQ9UKJ1 303 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 OR51B2Q9Y5P1 312 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 PCNTO95613 3336 aa5.05□□□□□ -1.6
HDAC9-203ENST00000406072 ESDP10768 282 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 GPR12P47775 334 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 UBE2NP61088 152 aaKnown RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PSG6Q00889 435 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 TM4SF20Q53R12 229 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 HES3Q5TGS1 186 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 LCN12Q6JVE5 192 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ATG4DQ86TL0 474 aaPredicted RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 Q8NFD4 153 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 OR4D5Q8NGN0 318 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PPP1R35Q8TAP8 253 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 FGF22Q9HCT0 170 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 SSUH2Q9Y2M2 353 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 GVINP1Q7Z2Y8 2422 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 HEATR5AQ86XA9 2040 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 TRAV38-1A0A0B4J264 116 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 A0A1B0GUS0 222 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PLPP3O14495 311 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CXorf1O96002 111 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ISG15P05161 165 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CD55P08174 381 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PSG2P11465 335 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 GPR183P32249 361 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CLDN15P56746 228 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ZNF141Q15928 474 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 LYRM7Q5U5X0 104 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ZNF519Q8TB69 540 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 KLHDC7BQ96G42 594 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ELOVL5Q9NYP7 299 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PILRBQ9UKJ0 227 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 IGHV1-69-2A0A0G2JMI3 117 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 SMIM13P0DJ93 91 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PEBP1P30086 187 aaKnown RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 MRPS11P82912 194 aaKnown RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 INSM1Q01101 510 aaPredicted RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ROM1Q03395 351 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PIGYQ3MUY2 71 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 IBA57Q5T440 356 aaKnown RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 KCNS1Q96KK3 526 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CSTL1Q9H114 145 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 UBTD1Q9HAC8 227 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 SH2D2AQ9NP31 389 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 HIF1ANQ9NWT6 349 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CEP250Q9BV73 2442 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 TRBV9A0A0B4J1U6 114 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 A1L4Q6 167 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 TMEM14DPA8MWL7 114 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 G3V3Y1 287 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ZNF324O75467 553 aaPredicted RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 OR2J3O76001 311 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 IGHV3-9P01782 118 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 C1QTNF9P0C862 333 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CT45A6P0DMU7 189 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CT45A5P0DMU8 189 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CT45A7P0DMV0 189 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CD38P28907 300 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CEACAM6P40199 344 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 FOXA3P55318 350 aaPredicted RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ARF6P62330 175 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 SRSF4Q08170 494 aaKnown RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 EDDM3AQ14507 147 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CT45A1Q5HYN5 189 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 SLC23A3Q6PIS1 610 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 TMEM136Q6ZRR5 245 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 Q6ZSR6 202 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 VN1R4Q7Z5H5 301 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 SELENOHQ8IZQ5 122 aaKnown RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 CT45A3Q8NHU0 189 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PLPPR2Q96GM1 343 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 PSMG3Q9BT73 122 aaPredicted RBP5.04□□□□□ -1.6
HDAC9-203ENST00000406072 GLRX2Q9NS18 164 aa5.04□□□□□ -1.6
HDAC9-203ENST00000406072 ADAMTS9Q9P2N4 1935 aa5.03□□□□□ -1.6
HDAC9-203ENST00000406072 C1QTNF9BB2RNN3 333 aa5.03□□□□□ -1.6
HDAC9-203ENST00000406072 F2RP25116 425 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms