RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 MGPP08493 103 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 HOXA4Q00056 320 aaPredicted RBP12.94□□□□□ -0.34
CHL1-202ENST00000397491 TUSC5Q8IXB3 177 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 FAM19A2Q8N3H0 131 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 RTBDNQ9BSG5 229 aaPredicted RBP12.94□□□□□ -0.34
CHL1-202ENST00000397491 IGHV3-21A0A0B4J1V1 117 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 A0A1W2PPE3 182 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 DLEU1O43261 78 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 EMP1P54849 157 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 FOXA3P55318 350 aaPredicted RBP12.94□□□□□ -0.34
CHL1-202ENST00000397491 PGPA6NDG6 321 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 J3KRW8 73 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.94□□□□□ -0.34
CHL1-202ENST00000397491 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
CHL1-202ENST00000397491 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 TPRX1Q8N7U7 411 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 SMOC1Q9H4F8 434 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 PRDM13Q9H4Q3 707 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 TMEM106BQ9NUM4 274 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 FOXS1O43638 330 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 COX7A1P24310 79 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 RIPPLY3P57055 190 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 PYY3Q5JQD4 70 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 FAM27BQ5VT28 67 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 MRPL13Q9BYD1 178 aaKnown RBP12.93□□□□□ -0.34
CHL1-202ENST00000397491 ONECUT1Q9UBC0 465 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 MIA3Q5JRA6 1907 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 SLC25A17O43808 307 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 UCP3P55916 312 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 GNB2P62879 340 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 LHFPL6Q9Y693 200 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 C2CD4DB7Z1M9 353 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 ZIC3O60481 467 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 HYPMO75409 117 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 SSTR5P35346 364 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 Q6ZS52 159 aa12.93□□□□□ -0.34
CHL1-202ENST00000397491 A0A1W2PRD5 423 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 A0A1W2PRF3 423 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 A0A1W2PRM7 423 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 LIPFP07098 398 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 ICAM4Q14773 271 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 ZNF721Q8TF20 911 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 C4orf51C9J302 202 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 H0YIZ8 118 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 DGAT2L7PQ6IED9 249 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 ZNF645Q8N7E2 425 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 GABRG3Q99928 467 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
CHL1-202ENST00000397491 C7orf71A4D174 169 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 PRRX1P54821 245 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 RPL31P62899 125 aaKnown RBP12.92□□□□□ -0.34
CHL1-202ENST00000397491 CEACAM21Q3KPI0 293 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 SPANXN1Q5VSR9 72 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 CCL17Q92583 94 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
CHL1-202ENST00000397491 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 HSPB7Q9UBY9 170 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 NDUFS8O00217 210 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 COL9A1P20849 921 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 STARD6P59095 220 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 SGK494Q96LW2 274 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 NRN1Q9NPD7 142 aa12.92□□□□□ -0.34
CHL1-202ENST00000397491 AMMECR1Q9Y4X0 333 aaPredicted RBP12.92□□□□□ -0.34
CHL1-202ENST00000397491 CEACAM18A8MTB9 384 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 RPL23P62829 140 aaKnown RBP12.91□□□□□ -0.34
CHL1-202ENST00000397491 RHBDD2Q6NTF9 364 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 PRRG2O14669 202 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 CD5P06127 495 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 ERGP11308 486 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 PSG4Q00888 419 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 A0A1B0GWB2 263 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 FAM157AC9JC47 383 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 TMPRSS2O15393 492 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 RND1Q92730 232 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 ZNF430Q9H8G1 570 aaPredicted RBP12.91□□□□□ -0.34
CHL1-202ENST00000397491 CACNA1EQ15878 2313 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 GOSR1O95249 250 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 CXCL1P09341 107 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 COX6CP09669 75 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 MMDQ15546 238 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 RTN4RQ9BZR6 473 aa12.91□□□□□ -0.34
CHL1-202ENST00000397491 ZNF646O15015 1829 aaPredicted RBP12.91□□□□□ -0.34
CHL1-202ENST00000397491 AMBPP02760 352 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 IL9P15248 144 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 GCHFRP30047 84 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.34
CHL1-202ENST00000397491 ZNF735P0CB33 412 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 GUSBP11Q6P575 273 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 SOX21Q9Y651 276 aaPredicted RBP12.9□□□□□ -0.34
CHL1-202ENST00000397491 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms