RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 IGHV3OR16-10A0A075B7F0 116 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 A0A0A6YYJ9 748 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 H0Y980 276 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 OR5AC1P0C628 307 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 THBS3P49746 956 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 LGALS4P56470 323 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 BRWD1-AS2P59051 145 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 CATR1Q13166 79 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 C17orf50Q8WW18 174 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 RPEQ96AT9 228 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 ADTRPQ96IZ2 230 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 ALG5Q9Y673 324 aa21.89■■□□□ 1.09
SSBP4-202ENST00000348495 GAPDHP04406 335 aaKnown RBP21.88■■□□□ 1.09
SSBP4-202ENST00000348495 RUSC1-AS1Q66K80 236 aa21.88■■□□□ 1.09
SSBP4-202ENST00000348495 ZNF431Q8TF32 576 aaPredicted RBP21.88■■□□□ 1.09
SSBP4-202ENST00000348495 NABP2Q9BQ15 211 aa21.88■■□□□ 1.09
SSBP4-202ENST00000348495 KCNIP3Q9Y2W7 256 aa21.88■■□□□ 1.09
SSBP4-202ENST00000348495 CELSR1Q9NYQ6 3014 aa21.88■■□□□ 1.09
SSBP4-202ENST00000348495 SNRPGP15A8MWD9 76 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 TXNL1O43396 289 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 B3GALNT1O75752 331 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 IFNA2P01563 188 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 SP6Q3SY56 376 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 GLYATL2Q8WU03 294 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 TCTEX1D2Q8WW35 142 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 MALSU1Q96EH3 234 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 TMUB1Q9BVT8 246 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 GPN1Q9HCN4 374 aaPredicted RBP21.87■■□□□ 1.09
SSBP4-202ENST00000348495 LIN7CQ9NUP9 197 aaKnown RBP21.87■■□□□ 1.09
SSBP4-202ENST00000348495 TLN2Q9Y4G6 2542 aa21.87■■□□□ 1.09
SSBP4-202ENST00000348495 A0A1W2PPI3 338 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 OOSP1A8MZH6 123 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 DUS4LO95620 317 aaKnown RBP21.86■■□□□ 1.09
SSBP4-202ENST00000348495 SLC9A3R2Q15599 337 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 C11orf88Q6PI97 169 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 BRD3OSQ6XYD6 125 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 DYNAPQ8N1N2 210 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 OR5AN1Q8NGI8 311 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 SVEP1Q4LDE5 3571 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 IGHV1-3A0A0C4DH29 117 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 A0A1B0GVG6 124 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 TMEM187Q14656 261 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 TCTEX1D1Q8N7M0 179 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 MITD1Q8WV92 249 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 TMEM222Q9H0R3 208 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 HILPDAQ9Y5L2 63 aa21.86■■□□□ 1.09
SSBP4-202ENST00000348495 EPHA1P21709 976 aa21.85■■□□□ 1.09
SSBP4-202ENST00000348495 UCP1P25874 307 aa21.85■■□□□ 1.09
SSBP4-202ENST00000348495 SSX2Q16385 188 aa21.85■■□□□ 1.09
SSBP4-202ENST00000348495 ANKRD55Q3KP44 614 aa21.85■■□□□ 1.09
SSBP4-202ENST00000348495 ZNF585BQ52M93 769 aa21.85■■□□□ 1.09
SSBP4-202ENST00000348495 FAM212BQ9NTI7 297 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-202ENST00000348495 H0YJW9 148 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 CREBL2O60519 120 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-202ENST00000348495 ANXA3P12429 323 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 BPIFB3P59826 476 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 OR8H3Q8N146 312 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 NANPQ8TBE9 248 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 CASTOR1Q8WTX7 329 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 PRR13Q9NZ81 148 aa21.84■■□□□ 1.09
SSBP4-202ENST00000348495 RAMP3O60896 148 aa21.83■■□□□ 1.09
SSBP4-202ENST00000348495 CBX3Q13185 183 aa21.83■■□□□ 1.09
SSBP4-202ENST00000348495 HABP2Q14520 560 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-202ENST00000348495 SPAG16Q8N0X2 631 aa21.83■■□□□ 1.09
SSBP4-202ENST00000348495 OR51J1Q9H342 316 aa21.83■■□□□ 1.09
SSBP4-202ENST00000348495 PRELID3BQ9Y3B1 194 aa21.83■■□□□ 1.09
SSBP4-202ENST00000348495 A8MV72 311 aaPredicted RBP21.83■■□□□ 1.08
SSBP4-202ENST00000348495 RBFOX2O43251 390 aaKnown RBP eCLIP21.83■■□□□ 1.084e-7■■■■□ 22.9
SSBP4-202ENST00000348495 FOSL1P15407 271 aa21.83■■□□□ 1.08
SSBP4-202ENST00000348495 OR2B11Q5JQS5 317 aa21.83■■□□□ 1.08
SSBP4-202ENST00000348495 A0A0B4J2A0 478 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 CDS2O95674 445 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 PAX6P26367 422 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 KIR2DS2P43631 304 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 TAGLNQ01995 201 aaKnown RBP21.82■■□□□ 1.08
SSBP4-202ENST00000348495 CCDC144NLQ6NUI1 221 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 LIAT1Q6ZQX7 453 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 LHFPL5Q8TAF8 219 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 CD300LFQ8TDQ1 290 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 TMEM56Q96MV1 263 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 SHPKQ9UHJ6 478 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 NUP50Q9UKX7 468 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 TMEM56-RWDD3S4R434 201 aa21.82■■□□□ 1.08
SSBP4-202ENST00000348495 LRTM2Q8N967 370 aa21.81■■□□□ 1.08
SSBP4-202ENST00000348495 CFHR4Q92496 578 aa21.81■■□□□ 1.08
SSBP4-202ENST00000348495 SMR3AQ99954 134 aa21.81■■□□□ 1.08
SSBP4-202ENST00000348495 A0A0U1RQK1 487 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 FCGR3BO75015 233 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 CD99P14209 185 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 C12orf45Q8N5I9 185 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-202ENST00000348495 PHB2Q99623 299 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 YAE1D1Q9NRH1 226 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 SLC35D1Q9NTN3 355 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 SOX21Q9Y651 276 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-202ENST00000348495 TIMM23O14925 209 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 SERPINE2P07093 398 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 MC5RP33032 325 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 MOB3BQ86TA1 216 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 TEX29Q8N6K0 151 aa21.8■■□□□ 1.08
SSBP4-202ENST00000348495 IGKV1-39P01597 117 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms