RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 KIAA1324LA8MWY0 1029 aaPredicted RBP17.33■□□□□ 0.36
VRK2-201ENST00000340157 ST8SIA3O43173 380 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 IGHV4-39P01824 125 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 C4BPBP20851 252 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 G6PCP35575 357 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 NKX2-1P43699 371 aaPredicted RBP17.33■□□□□ 0.36
VRK2-201ENST00000340157 DLX1P56177 255 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 ID3Q02535 119 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 LY6G5BQ8NDX9 201 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 CACNG5Q9UF02 275 aa17.33■□□□□ 0.36
VRK2-201ENST00000340157 A1L4Q6 167 aa17.32■□□□□ 0.36
VRK2-201ENST00000340157 FCGR3BO75015 233 aa17.32■□□□□ 0.36
VRK2-201ENST00000340157 NXPH3O95157 252 aa17.32■□□□□ 0.36
VRK2-201ENST00000340157 HKR1P10072 659 aa17.32■□□□□ 0.36
VRK2-201ENST00000340157 POLR2GP62487 172 aaKnown RBP eCLIP17.32■□□□□ 0.36
VRK2-201ENST00000340157 SMCO1Q147U7 214 aa17.32■□□□□ 0.36
VRK2-201ENST00000340157 ZNF596Q8TC21 504 aa17.32■□□□□ 0.36
VRK2-201ENST00000340157 RBMXL1Q96E39 390 aaKnown RBP17.32■□□□□ 0.36
VRK2-201ENST00000340157 PPIAL4CA0A0B4J2A2 164 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 BCL2L11O43521 198 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 KRASP01116 189 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 PPIAL4GP0DN37 164 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 ZNF383Q8NA42 475 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 RNASE11Q8TAA1 199 aaKnown RBP17.31■□□□□ 0.36
VRK2-201ENST00000340157 MAGT1Q9H0U3 335 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 MMP24Q9Y5R2 645 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 RLN2P04090 185 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 C8orf31Q8N9H6 132 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 CCL19Q99731 98 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 SESN1Q9Y6P5 492 aa17.31■□□□□ 0.36
VRK2-201ENST00000340157 E5RGE8 158 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 J3QR06 171 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 GNB2P62879 340 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 EXOSC2Q13868 293 aaKnown RBP17.3■□□□□ 0.36
VRK2-201ENST00000340157 ZNF833PQ6ZTB9 187 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 ZNF767PQ75MW2 155 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 LINC00311Q8N616 119 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 CD300LFQ8TDQ1 290 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 SSBP3Q9BWW4 388 aaPredicted RBP17.3■□□□□ 0.36
VRK2-201ENST00000340157 ZFP57Q9NU63 452 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 NSG2Q9Y328 171 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 VPS13CQ709C8 3753 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 FBN2P35556 2912 aa17.3■□□□□ 0.36
VRK2-201ENST00000340157 RBFOX2O43251 390 aaKnown RBP eCLIP17.29■□□□□ 0.36
VRK2-201ENST00000340157 TMEM50AO95807 157 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 PRB3Q04118 309 aaPredicted RBP17.29■□□□□ 0.36
VRK2-201ENST00000340157 MIDNQ504T8 468 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 RAB39BQ96DA2 213 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 TMEM133Q9H2Q1 129 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 KANTRA0A1W2PQU2 76 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 CT45A6P0DMU7 189 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 CT45A5P0DMU8 189 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 CT45A7P0DMV0 189 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 SP5Q6BEB4 398 aaPredicted RBP17.29■□□□□ 0.36
VRK2-201ENST00000340157 ZNF295-AS1Q8N0V1 137 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 S1PR3Q99500 378 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 BPESC1Q9GZL8 116 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 PLEKHA2Q9HB19 425 aa17.29■□□□□ 0.36
VRK2-201ENST00000340157 SPG11Q96JI7 2443 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 MARCH11A6NNE9 402 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 SSSCA1O60232 199 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 RPL12P30050 165 aaKnown RBP17.28■□□□□ 0.36
VRK2-201ENST00000340157 THBS3P49746 956 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 SLC51BQ86UW2 128 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 ABHD12Q8N2K0 398 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 CYTL1Q9NRR1 136 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 PRELID3BQ9Y3B1 194 aa17.28■□□□□ 0.36
VRK2-201ENST00000340157 HPRT1P00492 218 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 RBP4P02753 201 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 DIAPH2-AS1Q14236 149 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 Q8N7P7 452 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 OR9G1Q8NH87 305 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 ST6GALNAC6Q969X2 333 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 BSCL2Q96G97 398 aaPredicted RBP17.27■□□□□ 0.36
VRK2-201ENST00000340157 ARPC5LQ9BPX5 153 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 COA4Q9NYJ1 87 aa17.27■□□□□ 0.36
VRK2-201ENST00000340157 IGHV2-5P01817 119 aa17.27■□□□□ 0.35
VRK2-201ENST00000340157 LIPFP07098 398 aa17.27■□□□□ 0.35
VRK2-201ENST00000340157 P2RY1P47900 373 aa17.27■□□□□ 0.35
VRK2-201ENST00000340157 R3HDM4Q96D70 268 aa17.27■□□□□ 0.35
VRK2-201ENST00000340157 ADTRPQ96IZ2 230 aa17.27■□□□□ 0.35
VRK2-201ENST00000340157 TENM4Q6N022 2769 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 TET2Q6N021 2002 aaPredicted RBP17.26■□□□□ 0.35
VRK2-201ENST00000340157 IGHV2-26A0A0B4J1V2 119 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 SPDEFO95238 335 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 COX6B1P14854 86 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 ZFP36P26651 326 aaKnown RBP17.26■□□□□ 0.35
VRK2-201ENST00000340157 NUP62P37198 522 aaPredicted RBP17.26■□□□□ 0.35
VRK2-201ENST00000340157 KIR2DS2P43631 304 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 PAX9P55771 341 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 CLEC9AQ6UXN8 241 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 NRGNQ92686 78 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 MRPL20Q9BYC9 149 aaKnown RBP17.26■□□□□ 0.35
VRK2-201ENST00000340157 MED13LQ71F56 2210 aa17.26■□□□□ 0.35
VRK2-201ENST00000340157 LOC105371242A0A075B767 164 aa17.25■□□□□ 0.35
VRK2-201ENST00000340157 A0A1W2PPH5 198 aa17.25■□□□□ 0.35
VRK2-201ENST00000340157 CHST1O43916 411 aa17.25■□□□□ 0.35
VRK2-201ENST00000340157 ZNF137PP52743 207 aa17.25■□□□□ 0.35
VRK2-201ENST00000340157 VKORC1L1Q8N0U8 176 aa17.25■□□□□ 0.35
VRK2-201ENST00000340157 OR10X1Q8NGY0 326 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms