RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 G6PCP35575 357 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 POLR2GP62487 172 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTX3-201ENST00000295927 ID3Q02535 119 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 C8orf46Q8TAG6 207 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 MMP24Q9Y5R2 645 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 PPIAL4CA0A0B4J2A2 164 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 NXPH3O95157 252 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 PPIAL4GP0DN37 164 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 SLC51BQ86UW2 128 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 DDB2Q92466 427 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 MAGT1Q9H0U3 335 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 PRELID3BQ9Y3B1 194 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 AKAP6Q13023 2319 aa18.69■□□□□ 0.58
PTX3-201ENST00000295927 F5H0A9 414 aaPredicted RBP18.69■□□□□ 0.58
PTX3-201ENST00000295927 ATG12O94817 140 aa18.69■□□□□ 0.58
PTX3-201ENST00000295927 P0C879 139 aa18.69■□□□□ 0.58
PTX3-201ENST00000295927 RPL12P30050 165 aaKnown RBP18.69■□□□□ 0.58
PTX3-201ENST00000295927 GNB2P62879 340 aa18.69■□□□□ 0.58
PTX3-201ENST00000295927 EXOSC2Q13868 293 aaKnown RBP18.69■□□□□ 0.58
PTX3-201ENST00000295927 S1PR3Q99500 378 aa18.69■□□□□ 0.58
PTX3-201ENST00000295927 ARPC5LQ9BPX5 153 aa18.69■□□□□ 0.58
PTX3-201ENST00000295927 A0A087X0M5 115 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 A0A1B0GX30 115 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 THBS3P49746 956 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 C8orf31Q8N9H6 132 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 C11orf1Q9H5F2 150 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 PLEKHA2Q9HB19 425 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 KMT2BQ9UMN6 2715 aaPredicted RBP18.68■□□□□ 0.58
PTX3-201ENST00000295927 A0A1W2PPH5 198 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 RBFOX2O43251 390 aaKnown RBP eCLIP18.68■□□□□ 0.58
PTX3-201ENST00000295927 IFNA7P01567 189 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 LY6G5BQ8NDX9 201 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 ZNF596Q8TC21 504 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 CCL19Q99731 98 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 SESN1Q9Y6P5 492 aa18.68■□□□□ 0.58
PTX3-201ENST00000295927 KIAA1324LA8MWY0 1029 aaPredicted RBP18.67■□□□□ 0.58
PTX3-201ENST00000295927 C22orf46C9J442 243 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 J3QR06 171 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 SSSCA1O60232 199 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 HPRT1P00492 218 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 KIR2DS2P43631 304 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 LINC00311Q8N616 119 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 ZNF525Q8N782 197 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 ZNF383Q8NA42 475 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 ADTRPQ96IZ2 230 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 TMEM133Q9H2Q1 129 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 ZC4H2Q9NQZ6 224 aa18.67■□□□□ 0.58
PTX3-201ENST00000295927 SPDEFO95238 335 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 P2RY1P47900 373 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 ZNF833PQ6ZTB9 187 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 R3HDM4Q96D70 268 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 SSBP3Q9BWW4 388 aaPredicted RBP18.66■□□□□ 0.58
PTX3-201ENST00000295927 ZNF471Q9BX82 626 aaPredicted RBP18.66■□□□□ 0.58
PTX3-201ENST00000295927 A1L4Q6 167 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 IGHV4-39P01824 125 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 ABHD12Q8N2K0 398 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 OR9G1Q8NH87 305 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 COA4Q9NYJ1 87 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 UBQLN2Q9UHD9 624 aa18.66■□□□□ 0.58
PTX3-201ENST00000295927 UTP20O75691 2785 aaKnown RBP18.65■□□□□ 0.58
PTX3-201ENST00000295927 MARCH11A6NNE9 402 aa18.65■□□□□ 0.58
PTX3-201ENST00000295927 CT45A6P0DMU7 189 aa18.65■□□□□ 0.58
PTX3-201ENST00000295927 CT45A5P0DMU8 189 aa18.65■□□□□ 0.58
PTX3-201ENST00000295927 CT45A7P0DMV0 189 aa18.65■□□□□ 0.58
PTX3-201ENST00000295927 PVALBP20472 110 aaPredicted RBP18.65■□□□□ 0.58
PTX3-201ENST00000295927 UBA52P62987 128 aaKnown RBP18.65■□□□□ 0.58
PTX3-201ENST00000295927 SP5Q6BEB4 398 aaPredicted RBP18.65■□□□□ 0.58
PTX3-201ENST00000295927 H2BFWTQ7Z2G1 175 aa18.65■□□□□ 0.58
PTX3-201ENST00000295927 OR10X1Q8NGY0 326 aa18.65■□□□□ 0.58
PTX3-201ENST00000295927 WRBO00258 174 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 CHST1O43916 411 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 RBP4P02753 201 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 LIPFP07098 398 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 COX6B1P14854 86 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 HTR2BP41595 481 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 MIDNQ504T8 468 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 OR4S2Q8NH73 311 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 ST8SIA2Q92186 375 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 CYTL1Q9NRR1 136 aa18.64■□□□□ 0.58
PTX3-201ENST00000295927 ARHGAP32A7KAX9 2087 aa18.64■□□□□ 0.57
PTX3-201ENST00000295927 LOC105371242A0A075B767 164 aa18.64■□□□□ 0.57
PTX3-201ENST00000295927 GPR137BO60478 399 aa18.64■□□□□ 0.57
PTX3-201ENST00000295927 DLX1P56177 255 aa18.64■□□□□ 0.57
PTX3-201ENST00000295927 GPR157Q5UAW9 335 aa18.64■□□□□ 0.57
PTX3-201ENST00000295927 ONECUT1Q9UBC0 465 aa18.64■□□□□ 0.57
PTX3-201ENST00000295927 TMEM50AO95807 157 aa18.63■□□□□ 0.57
PTX3-201ENST00000295927 MMP9P14780 707 aa18.63■□□□□ 0.57
PTX3-201ENST00000295927 VAMP2P63027 116 aa18.63■□□□□ 0.57
PTX3-201ENST00000295927 OR8H3Q8N146 312 aa18.63■□□□□ 0.57
PTX3-201ENST00000295927 TOR1AO14656 332 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 ALKAL2Q6UX46 152 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 OR2C3Q8N628 320 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 BPESC1Q9GZL8 116 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 IGHV2-26A0A0B4J1V2 119 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 FAM24AA6NFZ4 105 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 CRYZL1O95825 349 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 IGHV2-5P01817 119 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 PAX9P55771 341 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 CLEC9AQ6UXN8 241 aa18.62■□□□□ 0.57
PTX3-201ENST00000295927 SLC7A5P1Q8MH63 180 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms