RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CYYR1Q96J86 154 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 DEFA4P12838 97 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 FCER1GP30273 86 aa3.94□□□□□ -1.78
VPS13C-201ENST00000249837 CPEB3Q8NE35 698 aaKnown RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 NOL4LQ96MY1 436 aaPredicted RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZDHHC8Q9ULC8 765 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 IGHV1-45A0A0A0MS14 117 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 IGHV3-48P01763 117 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CNN1P51911 297 aaKnown RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 VAMP3Q15836 100 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 HLA-DRB5Q30154 266 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 GATAD1Q8WUU5 269 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 IMMP1LQ96LU5 166 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 UMODP07911 640 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CT45A6P0DMU7 189 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CT45A5P0DMU8 189 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CT45A7P0DMV0 189 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CBLN1P23435 193 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 PRDX2P32119 198 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CDX1P47902 265 aaPredicted RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 UBE2G1P62253 170 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 COL10A1Q03692 680 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 HES1Q14469 280 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CT45A1Q5HYN5 189 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 DEFB124Q8NES8 71 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CT45A3Q8NHU0 189 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 RNF166Q96A37 237 aaPredicted RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 HSBP1O75506 76 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 PAX5Q02548 391 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 SRSF4Q08170 494 aaKnown RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TRAT1Q6PIZ9 186 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 Q6ZN92 141 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 OR4D5Q8NGN0 318 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZPBPQ9BS86 351 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CISD1Q9NZ45 108 aaKnown RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 OOEPA6NGQ2 149 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 C17orf98A8MV24 154 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 DIRC3C9JPN6 131 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 SERF2P84101 59 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 VKORC1L1Q8N0U8 176 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 PRDM6Q9NQX0 595 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 NAGKQ9UJ70 344 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TRGV10A0A0A0MS01 117 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 GRIFINA4D1Z8 144 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TNFAIP6P98066 277 aaPredicted RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TMEM183BQ1AE95 376 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 FGFBP3Q8TAT2 258 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 VN1R17PQ8TDU5 208 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF552Q9H707 407 aaPredicted RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ARHGAP32A7KAX9 2087 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 HOXA5P20719 270 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CCL1P22362 96 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 COX7A1P24310 79 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 DRAM1Q8N682 238 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF525Q8N782 197 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ATG101Q9BSB4 218 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 DDA1Q9BW61 102 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF355PQ9NSJ1 428 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 E9PLN8 166 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ORM2P19652 201 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 UCP1P25874 307 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 IL3RAP26951 378 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 CYB5R2Q6BCY4 276 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 SSX7Q7RTT5 188 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 MOB3BQ86TA1 216 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZBTB34Q8NCN2 500 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 OR4S2Q8NH73 311 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 REG1BP48304 166 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TIPARPQ7Z3E1 657 aaKnown RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 OR4P4Q8NGL7 312 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 REPIN1Q9BWE0 567 aaKnown RBP3.93□□□□□ -1.78
VPS13C-201ENST00000249837 PXMP4Q9Y6I8 212 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TECTAO75443 2155 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 SNURFLB1AK76 121 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF253O75346 499 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TFF3Q07654 80 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 GABRA6Q16445 453 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 OR5P3Q8WZ94 311 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 SRD5A3Q9H8P0 318 aa3.93□□□□□ -1.78
VPS13C-201ENST00000249837 TRBV6-7A0A0A0MS04 114 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ARL14EPLP0DKL9 152 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 HGFACQ04756 655 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SAXO1Q8IYX7 474 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ABHD12Q8N2K0 398 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 ZNF891A8MT65 544 aaPredicted RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 APELAP0DMC3 54 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 FBXW9Q5XUX1 488 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 C17orf82Q86X59 251 aaPredicted RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 WDFY1Q8IWB7 410 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 OR8I2Q8N0Y5 310 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 QTRT1Q9BXR0 403 aaKnown RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CLDN14O95500 239 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 C21orf62-AS1Q17RA5 79 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 SLC31A2O15432 143 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 WBP1Q96G27 269 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 IMMP2LQ96T52 175 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 IGLV3-32A0A0A0MS00 114 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CYB5R3P00387 301 aaPredicted RBP3.92□□□□□ -1.78
VPS13C-201ENST00000249837 CASP6P55212 293 aa3.92□□□□□ -1.78
VPS13C-201ENST00000249837 LINC00596Q86U02 117 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms